Browse: Families

Entries beginning with H
Name Accession Description Number Interacting Families Number Interacting Ligands Number Structures
H-kinase_dim PF02895 Signal transducing histidine kinase, homodimeric domain 3 1 2
H-K_ATPase_N PF09040 Gastric H+/K+-ATPase, N terminal domain 0 0 4
H2TH PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 4 23 73
HA PF03457 Helicase associated domain 0 0 1
HA2 PF04408 Helicase associated domain (HA2) 3 2 3
HABP4_PAI-RBP1 PF04774 Hyaluronan / mRNA binding family 4 0 2
HAD PF12710 haloacid dehalogenase-like hydrolase 1 10 13
HAD_2 PF13419 Haloacid dehalogenase-like hydrolase 1 38 91
Haemadin PF09065 Haemadin 1 0 1
Haemagg_act PF05860 haemagglutination activity domain 0 1 3
Haemocyan_bet_s PF14830 Haemocyanin beta-sandwich 2 2 3
Haemolytic PF01809 Haemolytic domain 0 0 0
Haem_bd PF14376 Haem-binding domain 0 0 0
Haem_oxygenas_2 PF14518 Iron-containing redox enzyme 2 3 1
Hairpins PF04877 HrpZ 0 0 0
Hairy_orange PF07527 Hairy Orange 1 1 1
Halogen_Hydrol PF10112 5-bromo-4-chloroindolyl phosphate hydrolysis protein 0 0 0
Halo_GVPC PF05465 Halobacterial gas vesicle protein C (GVPC) repeat 0 0 0
HalX PF08663 HalX domain 0 0 0
HALZ PF02183 Homeobox associated leucine zipper 0 0 0
Ham1p_like PF01725 Ham1 family 1 14 19
Hamartin PF04388 Hamartin protein 0 0 2
HAMP PF00672 HAMP domain 4 3 22
HAND PF09110 HAND 1 0 4
Hanta_G1 PF01567 Hantavirus glycoprotein G1 0 0 1
Hanta_G2 PF01561 Hantavirus glycoprotein G2 0 0 0
Hanta_nucleocap PF00846 Hantavirus nucleocapsid protein 1 0 4
HAP PF03866 Hydrophobic abundant protein (HAP) 0 0 0
HAP1_N PF04849 HAP1 N-terminal conserved region 0 0 0
HAP2-GCS1 PF10699 Male gamete fusion factor 0 0 0
Hap4_Hap_bind PF10297 Minimal binding motif of Hap4 for binding to Hap2/3/5 0 0 0
HapK PF11639 REDY-like protein HapK 1 0 1
Harakiri PF15196 Activator of apoptosis harakiri 0 1 2
HARE-HTH PF05066 HB1, ASXL, restriction endonuclease HTH domain 0 0 1
HARP PF07443 HepA-related protein (HARP) 0 0 0
HAS-barrel PF09378 HAS barrel domain 5 0 1
HasA PF06438 Heme-binding protein A (HasA) 3 11 16
HAT PF02184 HAT (Half-A-TPR) repeat 0 0 0
Hat1_N PF10394 Histone acetyl transferase HAT1 N-terminus 1 2 2
HATPase_c PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 17 209 326
HATPase_c_2 PF13581 Histidine kinase-like ATPase domain 0 0 0
HATPase_c_3 PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 5 38 49
HATPase_c_4 PF13749 ATP-dependent DNA helicase recG C-terminal 1 1 1
HATPase_c_5 PF14501 GHKL domain 0 0 0
HAUS-augmin3 PF14932 HAUS augmin-like complex subunit 3 0 0 0
HAUS2 PF15003 HAUS augmin-like complex subunit 2 0 0 0
HAUS4 PF14735 HAUS augmin-like complex subunit 4 0 0 0
HAUS5 PF14817 HAUS augmin-like complex subunit 5 0 0 0
HAUS6_N PF14661 HAUS augmin-like complex subunit 6 N-terminus 0 0 0
HbrB PF08539 HbrB-like 0 0 0
HBS1_N PF08938 HBS1 N-terminus 0 0 2
Hc1 PF07432 Histone H1-like protein Hc1 0 0 0
HC2 PF07382 Histone H1-like nucleoprotein HC2 0 0 0
HCaRG PF07258 HCaRG protein 0 0 1
HCBP_related PF06594 Haemolysin-type calcium binding protein related domain 0 0 0
Hce2 PF14856 Pathogen effector; putative necrosis-inducing factor 0 0 0
HCMVantigenic_N PF12154 Glycoprotein B N-terminal antigenic domain of HCMV 0 0 1
HCMV_UL139 PF12507 Human Cytomegalovirus UL139 protein 0 0 0
HCNGP PF07818 HCNGP-like protein 0 0 0
HCO3_cotransp PF00955 HCO3- transporter family 0 0 7
HCR PF07111 Alpha helical coiled-coil rod protein (HCR) 0 0 0
HCV_capsid PF01543 Hepatitis C virus capsid protein 0 0 5
HCV_core PF01542 Hepatitis C virus core protein 0 0 1
HCV_env PF01539 Hepatitis C virus envelope glycoprotein E1 0 0 2
HCV_NS1 PF01560 Hepatitis C virus non-structural protein E2/NS1 0 0 3
HCV_NS2 PF01538 Hepatitis C virus non-structural protein NS2 1 2 3
HCV_NS4a PF01006 Hepatitis C virus non-structural protein NS4a 2 3 33
HCV_NS4b PF01001 Hepatitis C virus non-structural protein NS4b 1 0 2
HCV_NS5a PF01506 Hepatitis C virus non-structural 5a protein membrane anchor 0 0 5
HCV_NS5a_1a PF08300 Hepatitis C virus non-structural 5a zinc finger domain 2 2 3
HCV_NS5a_1b PF08301 Hepatitis C virus non-structural 5a domain 1b 2 1 3
HCV_NS5a_C PF12941 HCV NS5a protein C-terminal region 1 0 1
HD PF01966 HD domain 3 23 26
HD-ZIP_N PF04618 HD-ZIP protein N terminus 0 0 0
HDA2-3 PF11496 Class II histone deacetylase complex subunits 2 and 3 1 1 2
HDAC4_Gln PF12203 Glutamine rich N terminal domain of histone deacetylase 4 1 0 2
HDC PF02329 Histidine carboxylase PI chain 1 2 6
HdeA PF06411 HdeA/HdeB family 1 2 3
hDGE_amylase PF14701 glucanotransferase domain of human glycogen debranching enzyme 0 0 0
HDNR PF15115 Domain of unknown function with conserved HDNR motif 0 0 0
HDOD PF08668 HDOD domain 2 5 7
HDPD PF02924 Bacteriophage lambda head decoration protein D 1 2 6
HDV_ag PF01517 Hepatitis delta virus delta antigen 1 0 2
HD_2 PF12917 HD containing hydrolase-like enzyme 1 3 1
HD_3 PF13023 HD domain 1 11 7
HD_4 PF13328 HD domain 1 1 1
HD_5 PF13487 HD domain 1 2 4
HD_assoc PF13286 Phosphohydrolase-associated domain 2 0 1
Head-tail_con PF12236 Bacteriophage head to tail connecting protein 0 0 1
Head_binding PF09008 Head binding 2 2 15
HEAT PF02985 HEAT repeat 5 2 23
HEAT_2 PF13646 HEAT repeats 6 4 15
HEAT_EZ PF13513 HEAT-like repeat 3 1 12
HEAT_PBS PF03130 PBS lyase HEAT-like repeat 0 0 1
HECA PF15353 Headcase protein family homologue 0 0 0
HECT PF00632 HECT-domain (ubiquitin-transferase) 4 8 17
HECT_2 PF09814 HECT-like Ubiquitin-conjugating enzyme (E2)-binding 0 0 0
hEGF PF12661 Human growth factor-like EGF 1 2 9
HeH PF12949 HeH/LEM domain 0 0 1
Helicase_C PF00271 Helicase conserved C-terminal domain 30 18 133
Helicase_C_2 PF13307 Helicase C-terminal domain 1 3 5
Helicase_C_3 PF13625 Helicase conserved C-terminal domain 0 0 0
Helicase_C_4 PF13871 Helicase_C-like 0 0 0
Helicase_IV_N PF12462 DNA helicase IV / RNA helicase N terminal 0 0 0
Helicase_RecD PF05127 Helicase 2 2 1
Helicase_Sgs1 PF11408 Sgs1 RecQ helicase 0 0 1
Helitron_like_N PF14214 Helitron helicase-like domain at N-terminus 0 0 0
HeLo PF14479 Prion-inhibition and propagation 2 3 3
HELP PF03451 HELP motif 0 0 0
HEM4 PF02602 Uroporphyrinogen-III synthase HemD 1 6 12
Hemagglutinin PF00509 Haemagglutinin 8 30 193
Hema_esterase PF03996 Hemagglutinin esterase 3 8 7
Hema_HEFG PF02710 Hemagglutinin domain of haemagglutinin-esterase-fusion glycoprotein 2 5 7
Hema_stalk PF08720 Influenza C hemagglutinin stalk 2 2 1
HemeBinding_Shp PF11545 Cell surface heme-binding protein Shp 1 2 1
Hemerythrin PF01814 Hemerythrin HHE cation binding domain 1 16 20
Heme_oxygenase PF01126 Heme oxygenase 1 36 76
HemN_C PF06969 HemN C-terminal domain 0 0 1
Hemocyanin_C PF03723 Hemocyanin, ig-like domain 3 5 10
Hemocyanin_M PF00372 Hemocyanin, copper containing domain 3 9 10
Hemocyanin_N PF03722 Hemocyanin, all-alpha domain 2 5 10
HemolysinCabind PF00353 Hemolysin-type calcium-binding repeat (2 copies) 2 5 34
Hemolysin_N PF12563 Hemolytic toxin N terminal 2 0 2
Hemopexin PF00045 Hemopexin 6 12 24
hemP PF10636 Hemin uptake protein hemP 1 0 2
HemS PF05171 Haemin-degrading HemS.ChuX domain 1 7 4
HemX PF04375 HemX 0 0 0
HemY_N PF07219 HemY protein N-terminus 0 0 0
Hen1_L PF12623 RNA repair, ligase-Pnkp-associating, region of Hen1 0 1 3
Hepar_II_III PF07940 Heparinase II/III-like protein 0 7 7
Hepatitis_core PF00906 Hepatitis core antigen 2 0 12
Hepcidin PF06446 Hepcidin 0 0 5
HEPN PF05168 HEPN domain 1 5 5
HEPPP_synt_1 PF07307 Heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1 0 0 0
Hepsin-SRCR PF09272 Hepsin, SRCR 2 0 5
Hep_59 PF07052 Hepatocellular carcinoma-associated antigen 59 0 0 0
Hep_core_N PF08290 Hepatitis core protein, putative zinc finger 0 0 0
Herp-Cyclin PF09241 Herpesviridae viral cyclin 2 0 5
Herpes_alk_exo PF01771 Herpesvirus alkaline exonuclease 1 3 4
Herpes_BBRF1 PF04793 BRRF1-like protein 0 0 0
Herpes_BLLF1 PF05109 Herpes virus major outer envelope glycoprotein (BLLF1) 0 5 1
Herpes_BLRF2 PF05812 Herpesvirus BLRF2 protein 1 2 2
Herpes_BMRF2 PF04633 Herpesvirus BMRF2 protein 0 0 0
Herpes_BTRF1 PF04682 Herpesvirus BTRF1 protein conserved region 0 0 0
Herpes_capsid PF06112 Gammaherpesvirus capsid protein 0 0 0
Herpes_DNAp_acc PF04929 Herpes DNA replication accessory factor 1 1 3
Herpes_env PF01673 Herpesvirus putative major envelope glycoprotein 0 0 0
Herpes_gE PF02480 Alphaherpesvirus glycoprotein E 2 0 2
Herpes_gI PF01688 Alphaherpesvirus glycoprotein I 0 0 0
Herpes_glycop PF01528 Herpesvirus glycoprotein M 0 0 0
Herpes_glycop_D PF01537 Herpesvirus glycoprotein D/GG/GX domain 2 5 6
Herpes_glycop_H PF02489 Herpesvirus glycoprotein H 4 2 4
Herpes_gp2 PF05955 Equine herpesvirus glycoprotein gp2 0 0 0
Herpes_Helicase PF02689 Helicase 0 0 0
Herpes_heli_pri PF05774 Herpesvirus helicase-primase complex component 0 0 0
Herpes_HEPA PF03324 Herpesvirus DNA helicase/primase complex associated protein 0 0 0
Herpes_ICP4_C PF03585 Herpesvirus ICP4-like protein C-terminal region 0 0 0
Herpes_ICP4_N PF03584 Herpesvirus ICP4-like protein N-terminal region 0 0 0
Herpes_IE1 PF07340 Cytomegalovirus IE1 protein 0 0 0
Herpes_IE2_3 PF03361 Herpes virus intermediate/early protein 2/3 0 0 0
Herpes_IE68 PF02479 Herpesvirus immediate early protein 0 0 0
Herpes_IR6 PF06307 Herpesvirus IR6 protein 0 0 0
Herpes_LAMP2 PF06126 Herpesvirus Latent membrane protein 2 0 0 0
Herpes_LMP1 PF05297 Herpesvirus latent membrane protein 1 (LMP1) 1 0 2
Herpes_LMP2 PF07415 Gammaherpesvirus latent membrane protein (LMP2) protein 2 1 2
Herpes_LP PF03363 Herpesvirus leader protein 0 0 0
Herpes_MCP PF03122 Herpes virus major capsid protein 1 0 1
Herpes_ORF11 PF04797 Herpesvirus dUTPase protein 0 0 0
Herpes_ori_bp PF02399 Origin of replication binding protein 0 0 0
Herpes_PAP PF03325 Herpesvirus polymerase accessory protein 0 2 2
Herpes_pp38 PF04846 Herpesvirus pp38 phosphoprotein 0 0 0
Herpes_pp85 PF04637 Herpesvirus phosphoprotein 85 (HHV6-7 U14/HCMV UL25) 0 0 0
Herpes_TAF50 PF03326 Herpesvirus transcription activation factor (transactivator) 0 0 0
Herpes_teg_N PF04843 Herpesvirus tegument protein, N-terminal conserved region 0 0 0
Herpes_TK PF00693 Thymidine kinase from herpesvirus 1 30 34
Herpes_TK_C PF08465 Thymidine kinase from Herpesvirus C-terminal 0 0 0
Herpes_U15 PF05613 Human herpesvirus U15 protein 0 0 0
Herpes_U26 PF07402 Human herpesvirus U26 protein 0 0 0
Herpes_U30 PF04523 Herpes virus tegument protein U30 0 0 0
Herpes_U34 PF04541 Herpesvirus virion protein U34 0 0 0
Herpes_U44 PF04533 Herpes virus U44 protein 0 0 0
Herpes_U47 PF05467 Herpesvirus glycoprotein U47 0 0 0
Herpes_U5 PF05999 Herpesvirus U5-like family 0 0 0
Herpes_U55 PF06501 Human herpesvirus U55 protein 0 0 0
Herpes_U59 PF04529 Herpesvirus U59 protein 0 0 0
Herpes_UL1 PF05259 Herpesvirus glycoprotein L 2 0 1
Herpes_UL14 PF03580 Herpesvirus UL14-like protein 0 0 0
Herpes_UL16 PF03044 Herpesvirus UL16/UL94 family 0 0 0
Herpes_UL17 PF04559 Herpesvirus UL17 protein 0 0 0
Herpes_UL20 PF04544 Herpesvirus egress protein UL20 0 0 0
Herpes_UL21 PF03252 Herpesvirus UL21 0 0 0
Herpes_UL24 PF01646 Herpes virus protein UL24 0 0 0
Herpes_UL25 PF01499 Herpesvirus UL25 family 0 0 1
Herpes_UL3 PF03369 Herpesvirus UL3 protein 0 0 0
Herpes_UL31 PF02718 Herpesvirus UL31-like protein 0 0 0
Herpes_UL32 PF06070 Herpesvirus large structural phosphoprotein UL32 0 0 0
Herpes_UL33 PF03581 Herpesvirus UL33-like protein 0 0 0
Herpes_UL35 PF04496 Herpesvirus UL35 family 0 0 0
Herpes_UL36 PF03586 Herpesvirus UL36 tegument protein 0 0 0
Herpes_UL37_1 PF03970 Herpesvirus UL37 tegument protein 0 0 0
Herpes_UL37_2 PF07413 Betaherpesvirus immediate-early glycoprotein UL37 0 0 0
Herpes_UL4 PF03277 Herpesvirus UL4 family 0 0 0
Herpes_UL42 PF02282 DNA polymerase processivity factor (UL42) 2 0 1
Herpes_UL43 PF05072 Herpesvirus UL43 protein 0 0 0
Herpes_UL45 PF05473 UL45 protein 0 0 0
Herpes_UL46 PF03387 Herpesvirus UL46 protein 0 0 0
Herpes_UL47 PF03362 Herpesvirus UL47 protein 0 0 0
Herpes_UL49_1 PF03117 UL49 family 0 0 0
Herpes_UL49_2 PF04823 Herpesvirus UL49 tegument protein 0 0 0
Herpes_UL49_5 PF05702 Herpesvirus UL49.5 envelope/tegument protein 0 0 0
Herpes_UL51 PF04540 Herpesvirus UL51 protein 0 0 0
Herpes_UL52 PF03121 Herpesviridae UL52/UL70 DNA primase 0 0 0
Herpes_UL55 PF04537 Herpesvirus UL55 protein 0 0 0
Herpes_UL56 PF04534 Herpesvirus UL56 protein 0 0 0
Herpes_UL6 PF01763 Herpesvirus UL6 like 0 0 0
Herpes_UL69 PF05459 Herpesvirus transcriptional regulator family 1 0 1
Herpes_UL7 PF01677 Herpesvirus UL7 like 0 0 0
Herpes_UL73 PF03554 UL73 viral envelope glycoprotein 0 0 0
Herpes_UL74 PF07982 Herpes UL74 glycoproteins 0 0 0
Herpes_UL79 PF03049 UL79 family 0 0 0
Herpes_UL82_83 PF05784 Betaherpesvirus UL82/83 protein N terminus 1 0 1
Herpes_UL87 PF03043 Herpesvirus UL87 family 0 0 0
Herpes_UL92 PF03048 UL92 family 0 0 0
Herpes_UL95 PF03038 UL95 family 0 0 0
Herpes_US12 PF05363 Herpesvirus US12 family 0 0 1
Herpes_US9 PF06072 Alphaherpesvirus tegument protein US9 0 0 0
Herpes_V23 PF01802 Herpesvirus VP23 like capsid protein 0 0 0
Herpes_VP19C PF03327 Herpesvirus capsid shell protein VP19C 0 0 0
Herpeto_peptide PF14409 Ribosomally synthesized peptide in Herpetosiphon 0 0 0
HERV-K_env_2 PF13804 Retro-transcribing viruses envelope glycoprotein 0 0 0
HET PF06985 Heterokaryon incompatibility protein (HET) 0 0 0
Het-C PF07217 Heterokaryon incompatibility protein Het-C 0 0 0
HET-s_218-289 PF11558 Het-s 218-289 2 1 6
HEV_ORF1 PF02444 Hepatitis E virus ORF-2 (Putative capsid protein) 0 0 0
Hexapep PF00132 Bacterial transferase hexapeptide (six repeats) 10 61 159
Hexapep_2 PF14602 Hexapeptide repeat of succinyl-transferase 5 15 46
HEXIM PF15313 Hexamethylene bis-acetamide-inducible protein 1 0 2
Hexokinase_1 PF00349 Hexokinase 2 34 51
Hexokinase_2 PF03727 Hexokinase 2 26 52
Hexose_dehydrat PF03559 NDP-hexose 2,3-dehydratase 1 4 2
Hex_IIIa PF02455 Hexon-associated protein (IIIa) 3 0 1
He_PIG PF05345 Putative Ig domain 0 0 0
He_PIG_assoc PF10632 He_PIG associated, NEW1 domain of bacterial glycohydrolase 0 0 0
HflK_N PF12221 Bacterial membrane protein N terminal 0 0 0
HGD-D PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component 1 5 3
hGDE_central PF14702 central domain of human glycogen debranching enzyme 0 0 0
hGDE_N PF14699 N-terminal domain from the human glycogen debranching enzyme 0 0 0
HgmA PF04209 homogentisate 1,2-dioxygenase 0 6 5
HGTP_anticodon PF03129 Anticodon binding domain 4 6 64
HGTP_anticodon2 PF12745 Anticodon binding domain of tRNAs 0 0 0
HGWP PF03578 HGWP repeat 0 0 0
HHA PF05321 Haemolysin expression modulating protein 0 1 4
HHH PF00633 Helix-hairpin-helix motif 3 7 34
HhH-GPD PF00730 HhH-GPD superfamily base excision DNA repair protein 6 44 100
HHH_2 PF12826 Helix-hairpin-helix motif 5 1 5
HHH_3 PF12836 Helix-hairpin-helix motif 1 2 5
HHH_4 PF14490 Helix-hairpin-helix containing domain 1 0 3
HHH_5 PF14520 Helix-hairpin-helix domain 11 5 47
HHH_6 PF14579 Helix-hairpin-helix motif 1 1 9
HHH_7 PF14635 Helix-hairpin-helix motif\ 3 0 2
HHH_8 PF14716 Helix-hairpin-helix domain 6 15 217
HHV6-IE PF03753 Human herpesvirus 6 immediate early protein 0 0 0
HH_signal PF01085 Hedgehog amino-terminal signalling domain 4 8 22
HI0933_like PF03486 HI0933-like protein 0 4 3
HiaBD2 PF15403 HiaBD2_N domain of Trimeric autotransporter adhesin (GIN) 1 0 1
HicB PF05534 HicB family 0 0 0
Hid1 PF12722 High-temperature-induced dauer-formation protein 0 0 0
HIF-1 PF11413 Hypoxia-inducible factor-1 2 3 5
HIF-1a_CTAD PF08778 HIF-1 alpha C terminal transactivation domain 2 1 5
HIGH_NTase1 PF05636 HIGH Nucleotidyl Transferase 0 1 1
HIG_1_N PF04588 Hypoxia induced protein conserved region 0 0 2
HILPDA PF15220 Hypoxia-inducible lipid droplet-associated 0 0 0
HIM1 PF08732 HIM1 0 0 0
HIN PF02760 HIN-200/IF120x domain 1 6 14
Hint PF01079 Hint module 1 1 12
Hint_2 PF13403 Hint domain 0 0 0
HipA_C PF07804 HipA-like C-terminal domain 4 11 14
HipA_N PF07805 HipA-like N-terminal domain 2 8 11
HIPIP PF01355 High potential iron-sulfur protein 1 3 22
Hira PF07569 TUP1-like enhancer of split 0 0 0
HIRAN PF08797 HIRAN domain 1 0 2
HIRA_B PF09453 HIRA B motif 1 0 1
Hirudin PF00713 Hirudin 1 2 140
HisG PF01634 ATP phosphoribosyltransferase 3 14 12
HisG_C PF08029 HisG, C-terminal domain 1 4 5
HisKA PF00512 His Kinase A (phospho-acceptor) domain 6 4 14
HisKA_2 PF07568 Histidine kinase 0 0 0
HisKA_3 PF07730 Histidine kinase 2 3 7
HisK_N PF09385 Histidine kinase N terminal 1 3 2
Histidinol_dh PF00815 Histidinol dehydrogenase 1 6 5
Histone PF00125 Core histone H2A/H2B/H3/H4 13 24 122
Histone_HNS PF00816 H-NS histone family 1 0 10
Hist_deacetyl PF00850 Histone deacetylase domain 3 43 55
Hist_rich_Ca-bd PF10529 Histidine-rich Calcium-binding repeat region 0 0 0
His_binding PF02098 Tick histamine binding protein 1 4 10
His_biosynth PF00977 Histidine biosynthesis protein 3 22 36
His_kinase PF06580 Histidine kinase 0 0 0
His_leader PF08047 Histidine operon leader peptide 0 0 0
His_Phos_1 PF00300 Histidine phosphatase superfamily (branch 1) 3 43 107
His_Phos_2 PF00328 Histidine phosphatase superfamily (branch 2) 1 32 42
HIT PF01230 HIT domain 1 32 55
Hjc PF01870 Archaeal holliday junction resolvase (hjc) 1 8 11
HJURP_C PF12347 Holliday junction regulator protein family C-terminal repeat 1 0 2
HJURP_mid PF12346 Holliday junction recognition protein-associated repeat 0 0 0
HK PF02110 Hydroxyethylthiazole kinase family 2 10 13
HK97-gp10_like PF04883 Bacteriophage HK97-gp10, putative tail-component 0 0 0
HLH PF00010 Helix-loop-helix DNA-binding domain 6 4 23
HlyC PF02794 RTX toxin acyltransferase family 0 0 0
HlyD PF00529 HlyD family secretion protein 2 4 5
HlyD_2 PF12700 HlyD family secretion protein 3 9 21
HlyD_3 PF13437 HlyD family secretion protein 0 0 0
HlyE PF06109 Haemolysin E (HlyE) 1 2 2
HlyIII PF03006 Haemolysin-III related 0 0 0
HlyU PF10115 Transcriptional activator HlyU 0 0 0
HMA PF00403 Heavy-metal-associated domain 5 24 89
HMD PF03201 H2-forming N5,N10-methylene-tetrahydromethanopterin dehydrogenase 0 2 8
HMG-CoA_red PF00368 Hydroxymethylglutaryl-coenzyme A reductase 1 34 35
HMG14_17 PF01101 HMG14 and HMG17 0 0 0
HMGL-like PF00682 HMGL-like 7 31 53
HMG_box PF00505 HMG (high mobility group) box 3 4 45
HMG_box_2 PF09011 HMG-box domain 0 5 13
HMG_box_5 PF14887 HMG (high mobility group) box 5 0 0 3
HMG_CoA_synt_C PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal 2 11 18
HMG_CoA_synt_N PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal 2 14 18
HmuY PF14064 HmuY protein 1 7 3
HN PF00423 Haemagglutinin-neuraminidase 5 24 33
HNF-1A_C PF04813 Hepatocyte nuclear factor 1 (HNF-1), alpha isoform C terminus 0 0 0
HNF-1B_C PF04812 Hepatocyte nuclear factor 1 (HNF-1), beta isoform C terminus 0 0 2
HNF-1_N PF04814 Hepatocyte nuclear factor 1 (HNF-1), N terminus 3 1 8
HNF_C PF09354 HNF3 C-terminal domain 0 0 0
HNH PF01844 HNH endonuclease 0 1 1
HNH_2 PF13391 HNH endonuclease 0 0 0
HNH_3 PF13392 HNH endonuclease 1 2 1
HNH_4 PF13395 HNH endonuclease 0 0 0
HNH_5 PF14279 HNH endonuclease 0 0 0
hNIFK_binding PF12196 FHA Ki67 binding domain of hNIFK 1 2 1
HNOB PF07700 Heme NO binding 1 14 28
HNOBA PF07701 Heme NO binding associated 1 2 4
HnRNPA1 PF11627 Nuclear factor hnRNPA1 0 0 0
HnRNP_M PF11532 Heterogeneous nuclear ribonucleoprotein M 1 0 1
HOASN PF14515 Haem-oxygenase-associated N-terminal helices 2 2 1
HobA PF12163 DNA replication regulator 1 5 2
HOK_GEF PF01848 Hok/gef family 0 0 0
Holin_BlyA PF05102 holin, BlyA family 0 0 0
Holin_LLH PF09682 Phage holin protein (Holin_LLH) 0 0 0
Homeobox PF00046 Homeobox domain 9 12 117
Homeobox_KN PF05920 Homeobox KN domain 1 2 4
Homez PF11569 Homeodomain leucine-zipper encoding, Homez 0 0 1
Homoserine_dh PF00742 Homoserine dehydrogenase 3 11 10
Hom_end PF05204 Homing endonuclease 3 2 8
Hom_end_hint PF05203 Hom_end-associated Hint 2 3 8
HOOK PF05622 HOOK protein 0 0 1
HopJ PF08888 HopJ type III effector protein 1 4 2
HopW1-1 PF15457 Type III T3SS secreted effector HopW1-1/HopPmaA 0 0 0
HORMA PF02301 HORMA domain 5 7 16
Hormone_1 PF00103 Somatotropin hormone family 2 3 23
Hormone_2 PF00123 Peptide hormone 3 7 25
Hormone_3 PF00159 Pancreatic hormone peptide 3 6 27
Hormone_4 PF00220 Neurohypophysial hormones, N-terminal Domain 0 0 0
Hormone_5 PF00184 Neurohypophysial hormones, C-terminal Domain 1 3 11
Hormone_6 PF00236 Glycoprotein hormone 4 4 9
Hormone_recep PF00104 Ligand-binding domain of nuclear hormone receptor 8 508 689
Host_attach PF10116 Protein required for attachment to host cells 0 0 0
Hox9_act PF04617 Hox9 activation region 0 0 0
HoxA13_N PF12284 Hox protein A13 N terminal 0 0 0
HpaB PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal 2 6 9
HpaB_N PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal 2 6 9
HpaP PF09483 Type III secretion protein (HpaP) 0 0 0
HpcH_HpaI PF03328 HpcH/HpaI aldolase/citrate lyase family 1 21 24
HPD PF05044 Homeo-prospero domain 0 1 3
Hph PF13694 Sec63/Sec62 complex-interacting family 0 0 0
HPHLAWLY PF14925 Domain of unknown function 0 0 0
HPIH PF13323 N-terminal domain with HPIH motif 0 0 0
HPIP PF15226 HCF-1 beta-propeller-interacting protein family 0 0 0
HPP PF04982 HPP family 0 0 0
HPPK PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 3 29 49
Hpre_diP_synt_I PF07456 Heptaprenyl diphosphate synthase component I 0 0 0
Hpr_kinase_C PF07475 HPr Serine kinase C-terminal domain 3 4 7
Hpr_kinase_N PF02603 HPr Serine kinase N terminus 2 1 2
HPS3_C PF14763 Hermansky-Pudlak syndrome 3, C-terminal 0 0 0
HPS3_Mid PF14762 Hermansky-Pudlak syndrome 3, middle region 0 0 0
HPS3_N PF14761 Hermansky-Pudlak syndrome 3 0 0 0
Hpt PF01627 Hpt domain 2 9 29
HP_OMP PF01856 Helicobacter outer membrane protein 0 0 0
HP_OMP_2 PF02521 Putative outer membrane protein 0 0 0
HR1 PF02185 Hr1 repeat 1 0 4
HrcA PF01628 HrcA protein C terminal domain 1 0 1
HrcA_DNA-bdg PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding 0 0 0
HRDC PF00570 HRDC domain 2 5 18
HRM PF02793 Hormone receptor domain 8 12 27
HrpA_pilin PF09589 HrpA pilus formation protein 0 0 0
HrpB1_HrpK PF09613 Bacterial type III secretion protein (HrpB1_HrpK) 0 0 0
HrpB2 PF09487 Bacterial type III secretion protein (HrpB2) 0 0 0
HrpB4 PF09502 Bacterial type III secretion protein (HrpB4) 0 0 0
HrpB7 PF09486 Bacterial type III secretion protein (HrpB7) 0 0 0
HrpB_C PF08482 ATP-dependent helicase C-terminal 0 0 0
HrpE PF06188 HrpE/YscL/FliH and V-type ATPase subunit E 0 0 0
HrpF PF06266 HrpF protein 0 0 0
HrpJ PF07201 HrpJ-like domain 3 2 5
Hrs_helical PF12210 Hepatocyte growth factor-regulated tyrosine kinase substrate 0 0 1
HRXXH PF13933 Putative peptidase family 0 0 0
HR_lesion PF05514 HR-like lesion-inducing 0 0 0
Hs1pro-1_C PF07014 Hs1pro-1 protein C-terminus 0 0 0
Hs1pro-1_N PF07231 Hs1pro-1 N-terminus 0 0 0
HS1_rep PF02218 Repeat in HS1/Cortactin 0 0 0
HSA PF07529 HSA 0 0 0
hSac2 PF12456 Inositol phosphatase 0 0 0
HsbA PF12296 Hydrophobic surface binding protein A 0 2 1
HSBP1 PF06825 Heat shock factor binding protein 1 1 0 1
HSCB_C PF07743 HSCB C-terminal oligomerisation domain 2 3 5
HSD3 PF15244 Hydroxy-steroid dehydrogenase 0 0 0
HsdM_N PF12161 HsdM N-terminal domain 2 2 7
HSDR_N PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) 2 2 3
HSDR_N_2 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) 1 1 1
HSF_DNA-bind PF00447 HSF-type DNA-binding 1 4 12
hSH3 PF14603 Helically-extended SH3 domain 0 0 1
HSL_N PF06350 Hormone-sensitive lipase (HSL) N-terminus 0 0 0
HSNSD PF12062 heparan sulfate-N-deacetylase 0 0 0
HSP20 PF00011 Hsp20/alpha crystallin family 2 9 34
HSP33 PF01430 Hsp33 protein 1 8 6
HSP70 PF00012 Hsp70 protein 8 31 112
HSP90 PF00183 Hsp90 protein 11 14 254
HSP9_HSP12 PF04119 Heat shock protein 9/12 0 0 3
HSV_VP16_C PF12149 Herpes simplex virus virion protein 16 C terminal 3 0 3
HtaA PF04213 Htaa 0 0 0
HTHP PF11534 Hexameric tyrosine-coordinated heme protein (HTHP) 1 2 1
HTH_1 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 2 9 22
HTH_10 PF04967 HTH DNA binding domain 0 0 0
HTH_11 PF08279 HTH domain 2 0 16
HTH_12 PF08461 Ribonuclease R winged-helix domain 0 0 0
HTH_13 PF11972 HTH DNA binding domain 0 0 0
HTH_15 PF12324 Helix-turn-helix domain of alkylmercury lyase 2 2 7
HTH_16 PF12645 Helix-turn-helix domain 0 0 0
HTH_17 PF12728 Helix-turn-helix domain 0 0 0
HTH_18 PF12833 Helix-turn-helix domain 3 5 10
HTH_19 PF12844 Helix-turn-helix domain 1 6 16
HTH_20 PF12840 Helix-turn-helix domain 1 6 18
HTH_21 PF13276 HTH-like domain 0 0 0
HTH_22 PF13309 HTH domain 0 0 0
HTH_23 PF13384 Homeodomain-like domain 1 0 1
HTH_24 PF13412 Winged helix-turn-helix DNA-binding 2 3 21
HTH_25 PF13413 Helix-turn-helix domain 1 1 2
HTH_26 PF13443 Cro/C1-type HTH DNA-binding domain 1 1 3
HTH_27 PF13463 Winged helix DNA-binding domain 1 2 11
HTH_28 PF13518 Helix-turn-helix domain 0 0 0
HTH_29 PF13551 Winged helix-turn helix 0 0 0
HTH_3 PF01381 Helix-turn-helix 8 27 86
HTH_30 PF13556 PucR C-terminal helix-turn-helix domain 1 3 1
HTH_31 PF13560 Helix-turn-helix domain 1 4 4
HTH_32 PF13565 Homeodomain-like domain 0 0 0
HTH_33 PF13592 Winged helix-turn helix 0 0 0
HTH_34 PF13601 Winged helix DNA-binding domain 0 0 1
HTH_35 PF13693 Winged helix-turn-helix DNA-binding 0 0 2
HTH_36 PF13730 Helix-turn-helix domain 0 0 0
HTH_37 PF13744 Helix-turn-helix domain 1 5 2
HTH_38 PF13936 Helix-turn-helix domain 2 0 1
HTH_39 PF14090 Helix-turn-helix domain 0 0 0
HTH_40 PF14493 Helix-turn-helix domain 0 0 0
HTH_41 PF14502 Helix-turn-helix domain 0 0 0
HTH_42 PF06224 Winged helix DNA-binding domain 0 0 0
HTH_43 PF09904 Winged helix-turn helix 1 3 1
HTH_44 PF14641 Helix-turn-helix DNA-binding domain of SPT6 2 0 2
HTH_45 PF14947 Winged helix-turn-helix 1 0 2
HTH_5 PF01022 Bacterial regulatory protein, arsR family 1 5 14
HTH_6 PF01418 Helix-turn-helix domain, rpiR family 2 3 3
HTH_7 PF02796 Helix-turn-helix domain of resolvase 2 3 15
HTH_8 PF02954 Bacterial regulatory protein, Fis family 2 3 32
HTH_9 PF08221 RNA polymerase III subunit RPC82 helix-turn-helix domain 1 1 2
HTH_AraC PF00165 Bacterial regulatory helix-turn-helix proteins, AraC family 1 0 5
HTH_AsnC-type PF13404 AsnC-type helix-turn-helix domain 1 0 17
HTH_CodY PF08222 CodY helix-turn-helix domain 2 0 1
HTH_Crp_2 PF13545 Crp-like helix-turn-helix domain 3 10 39
HTH_DeoR PF08220 DeoR-like helix-turn-helix domain 0 0 0
HTH_IclR PF09339 IclR helix-turn-helix domain 2 1 8
HTH_Mga PF08280 M protein trans-acting positive regulator (MGA) HTH domain 1 0 2
HTH_OrfB_IS605 PF12323 Helix-turn-helix domain 0 0 0
HTH_psq PF05225 helix-turn-helix, Psq domain 0 0 1
HTH_Tnp_1 PF01527 Transposase 0 0 2
HTH_Tnp_1_2 PF13022 Helix-turn-helix of insertion element transposase 1 0 1
HTH_Tnp_4 PF13613 Helix-turn-helix of DDE superfamily endonuclease 0 0 0
HTH_Tnp_IS1 PF12759 InsA C-terminal domain 0 0 0
HTH_Tnp_IS630 PF01710 Transposase 0 0 0
HTH_Tnp_ISL3 PF13542 Helix-turn-helix domain of transposase family ISL3 0 0 0
HTH_Tnp_Mu_1 PF02316 Mu DNA-binding domain 1 0 7
HTH_Tnp_Mu_2 PF09039 Mu DNA binding, I gamma subdomain 1 0 5
HTH_Tnp_Tc3_1 PF11427 Tc3 transposase 0 0 2
HTH_Tnp_Tc3_2 PF01498 Transposase 1 0 4
HTH_Tnp_Tc5 PF03221 Tc5 transposase DNA-binding domain 0 0 2
HTH_WhiA PF02650 WhiA C-terminal HTH domain 0 1 1
HtrL_YibB PF09612 Bacterial protein of unknown function (HtrL_YibB) 0 0 0
HTS PF04204 Homoserine O-succinyltransferase 0 3 3
HU-DNA_bdg PF14848 DNA-binding domain 0 0 0
Humanin PF15040 Humanin family 0 0 2
Hum_adeno_E3A PF05393 Human adenovirus early E3A glycoprotein 0 0 0
HUN PF08729 HPC2 and ubinuclein domain 0 0 0
HupE_UreJ PF04955 HupE / UreJ protein 0 0 0
HupE_UreJ_2 PF13795 HupE / UreJ protein 0 0 0
HupF_HypC PF01455 HupF/HypC family 3 3 7
HupH_C PF04809 HupH hydrogenase expression protein, C-terminal conserved region 1 2 1
Hus1 PF04005 Hus1-like protein 2 1 3
HutD PF05962 HutD 1 3 2
HutP PF09021 HutP 1 7 11
HVSL PF09749 Uncharacterised conserved protein 0 2 1
HWE_HK PF07536 HWE histidine kinase 0 0 0
HxlR PF01638 HxlR-like helix-turn-helix 1 10 11
HXXEE PF13787 Protein of unknown function with HXXEE motif 0 0 0
HxxPF_rpt PF13745 HxxPF-repeated domain 2 0 1
HXXSHH PF07586 Protein of unknown function (DUF1552) 0 0 0
HyaE PF07449 Hydrogenase-1 expression protein HyaE 1 3 6
Hyaluronidase_1 PF07212 Hyaluronidase protein (HylP) 0 3 8
HycA_repressor PF11046 Transcriptional repressor of hyc and hyp operons 0 0 0
Hyccin PF09790 Hyccin 0 0 0
HycH PF07450 Formate hydrogenlyase maturation protein HycH 0 0 0
HycI PF01750 Hydrogenase maturation protease 1 2 4
Hydantoinase_A PF01968 Hydantoinase/oxoprolinase 1 0 2
Hydantoinase_B PF02538 Hydantoinase B/oxoprolinase 0 0 0
Hydant_A_N PF05378 Hydantoinase/oxoprolinase N-terminal region 0 0 0
Hydrolase PF00702 haloacid dehalogenase-like hydrolase 5 53 146
Hydrolase_2 PF07486 Cell Wall Hydrolase 0 2 2
Hydrolase_3 PF08282 haloacid dehalogenase-like hydrolase 1 27 55
Hydrolase_4 PF12146 Putative lysophospholipase 0 0 0
Hydrolase_6 PF13344 Haloacid dehalogenase-like hydrolase 2 13 24
Hydrolase_like PF13242 HAD-hyrolase-like 2 13 35
Hydrolase_like2 PF13246 Putative hydrolase of sodium-potassium ATPase alpha subunit 0 0 0
Hydrophobin PF01185 Fungal hydrophobin 0 0 1
Hydrophobin_2 PF06766 Fungal hydrophobin 1 6 8
Hydrophob_seed PF14547 Hydrophobic seed protein 0 0 0
Hyd_WA PF06462 Propeller 0 0 0
HYLS1_C PF15311 Hydrolethalus syndrome protein 1 C-terminus 0 0 0
HypA PF01155 Hydrogenase expression/synthesis hypA family 1 1 3
HypD PF01924 Hydrogenase formation hypA family 3 3 5
Hyphal_reg_CWP PF11765 Hyphally regulated cell wall protein N-terminal 0 0 0
Hypoth_Ymh PF09509 Protein of unknown function (Hypoth_ymh) 0 0 0
HYR PF02494 HYR domain 0 0 0
H_kinase_N PF12282 Signal transduction histidine kinase 1 2 2
H_lectin PF09458 H-type lectin domain 2 15 12
H_PPase PF03030 Inorganic H+ pyrophosphatase 1 6 3