Browse: Families

Entries beginning with P
Name Accession Description Number Interacting Families Number Interacting Ligands Number Structures
P-II PF00543 Nitrogen regulatory protein P-II 5 18 45
P-mevalo_kinase PF04275 Phosphomevalonate kinase 0 2 1
P12 PF12669 Virus attachment protein p12 family 0 0 0
P120R PF08062 P120R (NUC006) repeat 0 0 0
p12I PF12233 Human adult T cell leukemia/lymphoma virus protein 0 0 0
P16-Arc PF04699 ARP2/3 complex 16 kDa subunit (p16-Arc) 3 1 18
P19Arf_N PF07392 Cyclin-dependent kinase inhibitor 2a p19Arf N-terminus 0 0 1
P2 PF07194 P2 response regulator binding domain 1 0 1
P21-Arc PF04062 ARP2/3 complex ARPC3 (21 kDa) subunit 1 0 18
P22_AR_C PF10548 P22AR C-terminal domain 0 0 0
P22_AR_N PF10547 P22_AR N-terminal domain 0 0 0
P22_CoatProtein PF11651 P22 coat protein - gene protein 5 0 0 4
P22_Cro PF14549 DNA-binding transcriptional regulator Cro 1 3 4
P22_Tail-4 PF11650 P22 tail accessory factor 1 1 2
p25-alpha PF05517 p25-alpha 0 0 3
P2X_receptor PF00864 ATP P2X receptor 2 6 5
P2_Phage_GpR PF06891 P2 phage tail completion protein R (GpR) 0 0 0
P30 PF07390 Mycoplasma P30 protein 0 0 0
p31comet PF06581 Mad1 and Cdc20-bound-Mad2 binding 2 1 1
P33MONOX PF15302 P33 mono-oxygenase 0 0 0
P34-Arc PF04045 Arp2/3 complex, 34 kD subunit p34-Arc 2 0 18
P35 PF02331 Apoptosis preventing protein 2 3 5
P3A PF08727 Poliovirus 3A protein like 1 0 1
p450 PF00067 Cytochrome P450 4 218 549
p47_phox_C PF08944 NADPH oxidase subunit p47Phox, C terminal domain 1 0 2
P4Ha_N PF08336 Prolyl 4-Hydroxylase alpha-subunit, N-terminal region 0 0 0
P5-ATPase PF12409 P5-type ATPase cation transporter 0 0 0
P53 PF00870 P53 DNA-binding domain 5 24 89
p53-inducible11 PF14936 Tumour protein p53-inducible protein 11 0 0 0
P53_C PF11619 Transcription factor P53 - C terminal domain 1 0 1
P53_TAD PF08563 P53 transactivation motif 3 0 12
P53_tetramer PF07710 P53 tetramerisation motif 2 2 27
P5CR_dimer PF14748 Pyrroline-5-carboxylate reductase dimerisation 2 11 11
P63C PF10546 P63C domain 0 0 0
P68HR PF08061 P68HR (NUC004) repeat 0 0 0
PA PF02225 PA domain 6 25 52
PA-IIL PF07472 Fucose-binding lectin II (PA-IIL) 1 21 31
PA-IL PF07828 PA-IL-like protein 1 13 10
PA14 PF07691 PA14 domain 4 11 35
PA14_2 PF10528 GLEYA domain 0 9 6
PA26 PF04636 PA26 p53-induced protein (sestrin) 0 0 0
PA28_alpha PF02251 Proteasome activator pa28 alpha subunit 2 0 1
PA28_beta PF02252 Proteasome activator pa28 beta subunit 2 0 1
PaaA_PaaC PF05138 Phenylacetic acid catabolic protein 1 14 11
PaaB PF06243 Phenylacetic acid degradation B 1 2 1
PAAR_motif PF05488 PAAR motif 0 1 2
PaaSYMP PF14738 Solute carrier (proton/amino acid symporter), TRAMD3 or PAT1 0 0 0
PaaX PF07848 PaaX-like protein 1 2 2
PaaX_C PF08223 PaaX-like protein C-terminal domain 2 2 2
Pab87_oct PF13969 Pab87 octamerisation domain 2 1 1
PABP PF00658 Poly-adenylate binding protein, unique domain 2 7 21
PAC2 PF09754 PAC2 family 3 5 7
Pacifastin_I PF05375 Pacifastin inhibitor (LCMII) 1 0 11
Packaging_FI PF14000 DNA packaging protein FI 0 0 1
Pacs-1 PF10254 PACS-1 cytosolic sorting protein 0 0 0
PACT_coil_coil PF10495 Pericentrin-AKAP-450 domain of centrosomal targeting protein 0 0 0
PAD PF03068 Protein-arginine deiminase (PAD) 2 9 12
PadR PF03551 Transcriptional regulator PadR-like family 2 11 16
PADR1 PF08063 PADR1 (NUC008) domain 3 2 3
PAD_M PF08527 Protein-arginine deiminase (PAD) middle domain 2 1 12
PAD_N PF08526 Protein-arginine deiminase (PAD) N-terminal domain 2 0 12
PAD_porph PF04371 Porphyromonas-type peptidyl-arginine deiminase 1 10 10
PAE PF03283 Pectinacetylesterase 0 0 0
PAF-AH_p_II PF03403 Platelet-activating factor acetylhydrolase, isoform II 1 8 6
Paf1 PF03985 Paf1 0 0 0
Paf67 PF10255 RNA polymerase I-associated factor PAF67 0 0 0
PAG PF15347 Phosphoprotein associated with glycosphingolipid-enriched 0 0 0
PAGK PF15284 Phage-encoded virulence factor 0 0 0
PagL PF09411 Lipid A 3-O-deacylase (PagL) 1 2 1
PagP PF07017 Antimicrobial peptide resistance and lipid A acylation protein PagP 0 7 4
PAH PF02671 Paired amphipathic helix repeat 2 0 12
Paired_CXXCH_1 PF09699 Doubled CXXCH motif (Paired_CXXCH_1) 0 0 0
Pal1 PF08316 Pal1 cell morphology protein 0 0 0
PalH PF08733 PalH/RIM21 0 0 0
Palm_thioest PF02089 Palmitoyl protein thioesterase 1 7 5
PALP PF00291 Pyridoxal-phosphate dependent enzyme 6 73 171
Pam16 PF03656 Pam16 2 1 1
Pam17 PF08566 Mitochondrial import protein Pam17 0 0 0
PAM2 PF07145 Ataxin-2 C-terminal region 2 1 9
Pantoate_ligase PF02569 Pantoate-beta-alanine ligase 1 52 56
Pantoate_transf PF02548 Ketopantoate hydroxymethyltransferase 1 9 6
PAN_1 PF00024 PAN domain 4 11 28
PAN_2 PF08276 PAN-like domain 0 0 0
PAN_3 PF08277 PAN-like domain 0 0 0
PAN_4 PF14295 PAN domain 2 2 3
Pan_kinase PF03309 Type III pantothenate kinase 1 9 9
PaO PF08417 Pheophorbide a oxygenase 0 0 0
PAP1 PF08601 Transcription factor PAP1 1 0 1
PAP2 PF01569 PAP2 superfamily 1 8 19
PAP2_3 PF14378 PAP2 superfamily 0 0 0
PAP2_C PF14360 PAP2 superfamily C-terminal 0 0 0
PAPA-1 PF04795 PAPA-1-like conserved region 0 0 0
PapB PF03333 Adhesin biosynthesis transcription regulatory protein 1 0 1
PapC_C PF13953 PapC C-terminal domain 4 2 5
PapC_N PF13954 PapC N-terminal domain 5 4 11
PapD-like PF14874 Flagellar-associated PapD-like 0 0 0
PapD_C PF02753 Pili assembly chaperone PapD, C-terminal domain 11 5 46
PapD_N PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 12 13 46
PapG_C PF03628 PapG chaperone-binding domain 3 0 2
PapG_N PF03627 PapG carbohydrate binding domain 3 5 4
Papilloma_E5 PF03025 Papillomavirus E5 0 0 0
Papilloma_E5A PF05776 Papillomavirus E5A protein 0 0 0
PapJ PF14855 Pilus-assembly fibrillin subunit, chaperone 0 0 0
Papo_T_antigen PF02380 T-antigen specific domain 4 1 2
PAPS_reduct PF01507 Phosphoadenosine phosphosulfate reductase family 4 16 11
PAP_assoc PF03828 Cid1 family poly A polymerase 2 6 23
PAP_central PF04928 Poly(A) polymerase central domain 3 14 8
Pap_E4 PF02711 E4 protein 0 0 0
PAP_fibrillin PF04755 PAP_fibrillin 0 0 0
PAP_PilO PF06864 Pilin accessory protein (PilO) 0 0 0
PAP_RNA-bind PF04926 Poly(A) polymerase predicted RNA binding domain 2 2 8
PAR1 PF06521 PAR1 protein 0 0 0
ParA PF10609 ParA/MinD ATPase like 2 3 2
Paralemmin PF03285 Paralemmin 0 0 0
Paramecium_SA PF01508 Paramecium surface antigen domain 0 0 0
Paramyxo_C PF01692 Paramyxovirus non-structural protein c 0 0 0
Paramyxo_ncap PF00973 Paramyxovirus nucleocapsid protein 2 1 4
Paramyxo_NS_C PF02725 Non-structural protein C 0 0 0
Paramyxo_P PF01806 Paramyxovirinae P phosphoprotein C-terminal region 0 2 2
Paramyxo_PCT PF14320 Phosphoprotein P region PCT disordered 0 0 0
Paramyxo_PNT PF13825 Paramyxovirus structural protein V/P N-terminus 0 0 0
Paramyx_P_V_C PF03210 Paramyxovirus P/V phosphoprotein C-terminal 2 6 6
Parathyroid PF01279 Parathyroid hormone family 4 4 19
ParB PF08775 ParB family 1 2 3
ParBc PF02195 ParB-like nuclease domain 5 8 10
ParBc_2 PF08857 Putative ParB-like nuclease 1 1 1
ParcG PF10274 Parkin co-regulated protein 0 0 0
ParD PF09386 Antitoxin ParD 1 0 1
Pardaxin PF07425 Pardaxin 0 0 2
Parecho_VpG PF06344 Parechovirus Genome-linked protein 0 0 0
PaREP1 PF05942 Archaeal PaREP1/PaREP8 family 1 0 2
PaRep2a PF07903 PaRep2a protein 0 0 0
PaRep2b PF07775 PaRep2b protein 0 0 0
ParG PF09274 ParG 1 0 1
PARG_cat PF05028 Poly (ADP-ribose) glycohydrolase (PARG) 1 11 11
PARP PF00644 Poly(ADP-ribose) polymerase catalytic domain 2 80 86
PARP_reg PF02877 Poly(ADP-ribose) polymerase, regulatory domain 5 4 31
PARP_regulatory PF01358 Poly A polymerase regulatory subunit 4 12 22
Parvo_coat PF00740 Parvovirus coat protein VP2 1 12 39
Parvo_coat_N PF08398 Parvovirus coat protein VP1 0 0 0
Parvo_NS1 PF01057 Parvovirus non-structural protein NS1 1 1 3
PAS PF00989 PAS fold 6 24 97
PASTA PF03793 PASTA domain 3 4 17
PAS_10 PF13596 PAS domain 1 2 2
PAS_11 PF14598 PAS domain 3 6 19
PAS_2 PF08446 PAS fold 2 5 19
PAS_3 PF08447 PAS fold 1 6 10
PAS_4 PF08448 PAS fold 1 9 8
PAS_5 PF07310 PAS domain 0 0 0
PAS_6 PF08348 YheO-like PAS domain 0 0 0
PAS_7 PF12860 PAS fold 0 0 0
PAS_8 PF13188 PAS domain 1 3 4
PAS_9 PF13426 PAS domain 3 19 65
Pas_Saposin PF09016 Pas factor saposin fold 0 0 1
PAT1 PF09770 Topoisomerase II-associated protein PAT1 2 4 4
Patatin PF01734 Patatin-like phospholipase 0 1 4
Patched PF02460 Patched family 0 0 0
Pathogen_betaC1 PF09593 Beta-satellite pathogenicity beta C1 protein 0 0 0
PAX PF00292 'Paired box' domain 1 0 5
Pax2_C PF12403 Paired-box protein 2 C terminal 0 0 0
Pax7 PF12360 Paired box protein 7 0 0 0
Paxillin PF03535 Paxillin family 3 0 6
PAXIP1_C PF15364 PAXIP1-associated-protein-1 C term PTIP binding protein 0 0 0
PAXNEB PF05625 PAXNEB protein 1 1 2
PAZ PF02170 PAZ domain 4 5 25
PAZ_siRNAbind PF12212 Piwi/Argonaute/Zwille siRNA-binding domain 1 1 4
PA_decarbox PF05870 Phenolic acid decarboxylase (PAD) 1 10 10
PB1 PF00564 PB1 domain 4 5 24
PB1-F2 PF11986 Influenza A Proapoptotic protein 1 0 2
PBAN PF05874 Pheromone biosynthesis activating neuropeptide (PBAN) 0 0 0
PBC PF03792 PBC domain 0 0 0
PBCV_basic_adap PF08789 PBCV-specific basic adaptor domain 0 0 0
PBD PF00786 P21-Rho-binding domain 5 6 13
PBP PF01161 Phosphatidylethanolamine-binding protein 3 10 23
PBP-Tp47_a PF14889 Penicillin-binding protein Tp47 domain a 1 2 1
PBP-Tp47_c PF14888 Penicillin-binding protein Tp47 domain C 2 2 1
PBP1_TM PF14812 Transmembrane domain of transglycosylase PBP1 at N-terminal 0 0 2
PBP5_C PF07943 Penicillin-binding protein 5, C-terminal domain 2 6 18
PBP_dimer PF03717 Penicillin-binding Protein dimerisation domain 4 7 36
PBP_GOBP PF01395 PBP/GOBP family 1 60 96
PBP_like PF12727 PBP superfamily domain 0 5 1
PBP_like_2 PF12849 PBP superfamily domain 1 19 30
PBP_sp32 PF07222 Proacrosin binding protein sp32 0 0 0
PBS_linker_poly PF00427 Phycobilisome Linker polypeptide 1 4 8
PC-Esterase PF13839 GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 0 0 0
PC4 PF02229 Transcriptional Coactivator p15 (PC4) 2 5 9
PCAF_N PF06466 PCAF (P300/CBP-associated factor) N-terminal domain 0 0 0
Pcc1 PF09341 Transcription factor Pcc1 3 4 8
PCDO_beta_N PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal 2 12 47
PCEMA1 PF07418 Acidic phosphoprotein precursor PCEMA1 0 0 0
PcF PF09461 Phytotoxin PcF protein 0 0 1
PcfJ PF14284 PcfJ-like protein 0 0 0
PcfK PF14058 PcfK-like protein 0 0 0
PCI PF01399 PCI domain 7 5 9
PCIF1_WW PF12237 Phosphorylated CTD interacting factor 1 WW domain 0 0 0
PCI_Csn8 PF10075 COP9 signalosome, subunit CSN8 0 2 1
PCMT PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 1 11 12
PCNA_C PF02747 Proliferating cell nuclear antigen, C-terminal domain 10 12 56
PCNA_N PF00705 Proliferating cell nuclear antigen, N-terminal domain 10 16 56
PCNP PF15473 PEST, proteolytic signal-containing nuclear protein family 0 0 0
PCP PF02429 Peridinin-chlorophyll A binding protein 1 12 7
PCP_red PF08369 Proto-chlorophyllide reductase 57 kD subunit 0 0 2
PcrB PF01884 PcrB family 1 11 14
PCRF PF03462 PCRF domain 1 2 20
PCYCGC PF13798 Protein of unknown function with PCYCGC motif 0 0 0
PC_rep PF01851 Proteasome/cyclosome repeat 2 1 3
PD-C2-AF1 PF09310 POU domain, class 2, associating factor 1 2 0 1
PD40 PF07676 WD40-like Beta Propeller Repeat 7 5 13
Pdase_C33_assoc PF14756 Peptidase_C33-associated domain 0 0 0
PDCD2_C PF04194 Programmed cell death protein 2, C-terminal putative domain 0 0 0
PDCD9 PF07147 Mitochondrial 28S ribosomal protein S30 (PDCD9) 0 0 0
PDDEXK_1 PF12705 PD-(D/E)XK nuclease superfamily 3 4 5
PDDEXK_2 PF12784 PD-(D/E)XK nuclease family transposase 0 0 0
PDDEXK_3 PF13366 PD-(D/E)XK nuclease superfamily 0 0 0
PDDEXK_4 PF14281 PD-(D/E)XK nuclease superfamily 0 0 0
PDDEXK_5 PF11645 PD-(D/E)XK endonuclease 1 1 1
PDE6_gamma PF04868 Retinal cGMP phosphodiesterase, gamma subunit 3 1 3
PDE8 PF08629 PDE8 phosphodiesterase 0 0 0
PDEase_I PF00233 3'5'-cyclic nucleotide phosphodiesterase 3 123 166
PDEase_II PF02112 cAMP phosphodiesterases class-II 0 0 0
PDEase_I_N PF08499 3'5'-cyclic nucleotide phosphodiesterase N-terminal 0 0 0
PDGF PF00341 PDGF/VEGF domain 4 12 42
PDGF_N PF04692 Platelet-derived growth factor, N terminal region 2 0 3
PDGLE PF13190 PDGLE domain 0 0 0
PDH PF02153 Prephenate dehydrogenase 1 13 9
PDR_assoc PF08370 Plant PDR ABC transporter associated 0 0 0
PDR_CDR PF06422 CDR ABC transporter 0 0 0
PDT PF00800 Prephenate dehydratase 2 4 4
PduL PF06130 Propanediol utilisation protein PduL 0 0 0
PduV-EutP PF10662 Ethanolamine utilisation - propanediol utilisation 0 0 0
PdxA PF04166 Pyridoxal phosphate biosynthetic protein PdxA 1 10 9
PdxJ PF03740 Pyridoxal phosphate biosynthesis protein PdxJ 1 6 11
PDZ PF00595 PDZ domain (Also known as DHR or GLGF) 19 39 356
PDZ_1 PF12812 PDZ-like domain 0 0 0
PDZ_2 PF13180 PDZ domain 6 4 27
PDZ_assoc PF10600 PDZ-associated domain of NMDA receptors 2 1 20
PE PF00934 PE family 2 0 1
PE-PPE PF08237 PE-PPE domain 0 0 0
Pea-VEAacid PF08111 Pea-VEAacid family 0 0 0
PEARLI-4 PF05278 Arabidopsis phospholipase-like protein (PEARLI 4) 0 0 0
Pecanex_C PF05041 Pecanex protein (C-terminus) 0 0 0
Pectate_lyase PF03211 Pectate lyase 1 14 6
Pectate_lyase22 PF14583 Oligogalacturonate lyase 1 4 2
Pectate_lyase_2 PF06917 Periplasmic pectate lyase 0 3 3
Pectate_lyase_3 PF12708 Pectate lyase superfamily protein 3 24 17
Pectinesterase PF01095 Pectinesterase 2 4 12
Pec_lyase PF09492 Pectic acid lyase 1 6 4
Pec_lyase_C PF00544 Pectate lyase 1 8 40
Pec_lyase_N PF04431 Pectate lyase, N terminus 0 0 0
Pedibin PF08182 Pedibin/Hym-346 family 0 0 0
PEGA PF08308 PEGA domain 0 0 0
PEGSRP PF07623 Protein of unknown function (DUF1584) 0 0 0
PEHE PF15275 PEHE domain 3 0 2
Pellino PF04710 Pellino 1 2 2
PELOTA_1 PF15608 PELOTA RNA binding domain 0 0 0
PemK PF02452 PemK-like protein 2 3 5
PEMT PF04191 Phospholipid methyltransferase 0 0 0
PEN-2 PF10251 Presenilin enhancer-2 subunit of gamma secretase 0 0 0
Penaeidin PF05927 Penaeidin 0 0 2
Penicillinase_R PF03965 Penicillinase repressor 1 5 11
Penicil_amidase PF01804 Penicillin amidase 1 31 56
Pentapeptide PF00805 Pentapeptide repeats (8 copies) 3 5 13
Pentapeptide_2 PF01469 Pentapeptide repeats (8 copies) 0 0 0
Pentapeptide_3 PF13576 Pentapeptide repeats (9 copies) 2 0 4
Pentapeptide_4 PF13599 Pentapeptide repeats (9 copies) 4 12 14
Pentaxin PF00354 Pentaxin family 2 18 22
PEP-utilisers_N PF05524 PEP-utilising enzyme, N-terminal 4 1 17
PEP-utilizers PF00391 PEP-utilising enzyme, mobile domain 7 4 33
PEP-utilizers_C PF02896 PEP-utilising enzyme, TIM barrel domain 5 10 26
Pep3_Vps18 PF05131 Pep3/Vps18/deep orange family 0 0 0
PEPcase PF00311 Phosphoenolpyruvate carboxylase 1 5 6
PEPcase_2 PF14010 Phosphoenolpyruvate carboxylase 1 2 1
PEPCK PF00821 Phosphoenolpyruvate carboxykinase 1 28 36
PEPCK_ATP PF01293 Phosphoenolpyruvate carboxykinase 1 20 18
Pepsin-I3 PF06394 Pepsin inhibitor-3-like repeated domain 1 0 2
PepSY PF03413 Peptidase propeptide and YPEB domain 4 3 6
PepSY_2 PF13670 Peptidase propeptide and YPEB domain 0 0 0
PepSY_TM PF03929 PepSY-associated TM helix 0 0 0
PepSY_TM_1 PF13172 PepSY-associated TM helix 0 0 0
PepSY_TM_2 PF13703 PepSY-associated TM helix 0 0 0
PepSY_TM_3 PF13706 PepSY-associated TM helix 0 0 0
Peptidase_A17 PF05380 Pao retrotransposon peptidase 0 0 0
Peptidase_A21 PF03566 Peptidase family A21 1 3 3
Peptidase_A22B PF04258 Signal peptide peptidase 1 0 2
Peptidase_A24 PF01478 Type IV leader peptidase family 2 1 1
Peptidase_A25 PF03418 Germination protease 1 0 1
Peptidase_A2B PF12384 Ty3 transposon peptidase 0 0 0
Peptidase_A2E PF12382 Retrotransposon peptidase 0 0 0
Peptidase_A3 PF02160 Cauliflower mosaic virus peptidase (A3) 0 0 0
Peptidase_A4 PF01828 Peptidase A4 family 1 5 6
Peptidase_A6 PF01829 Peptidase A6 family 1 3 8
Peptidase_A8 PF01252 Signal peptidase (SPase) II 0 0 0
Peptidase_C1 PF00112 Papain family cysteine protease 10 181 236
Peptidase_C10 PF01640 Peptidase C10 family 2 4 9
Peptidase_C11 PF03415 Clostripain family 1 2 1
Peptidase_C12 PF01088 Ubiquitin carboxyl-terminal hydrolase, family 1 2 12 19
Peptidase_C13 PF01650 Peptidase C13 family 0 3 4
Peptidase_C14 PF00656 Caspase domain 3 64 182
Peptidase_C15 PF01470 Pyroglutamyl peptidase 1 10 19
Peptidase_C16 PF01831 Peptidase C16 family 0 0 0
Peptidase_C1_2 PF03051 Peptidase C1-like family 1 9 13
Peptidase_C2 PF00648 Calpain family cysteine protease 4 14 22
Peptidase_C21 PF05381 Tymovirus endopeptidase 1 0 1
Peptidase_C23 PF05379 Carlavirus endopeptidase 0 0 0
Peptidase_C24 PF03510 2C endopeptidase (C24) cysteine protease family 0 0 0
Peptidase_C25 PF01364 Peptidase family C25 2 6 2
Peptidase_C25_C PF03785 Peptidase family C25, C terminal ig-like domain 1 1 2
Peptidase_C26 PF07722 Peptidase C26 1 3 2
Peptidase_C27 PF05407 Rubella virus endopeptidase 0 0 0
Peptidase_C28 PF05408 Foot-and-mouth virus L-proteinase 1 2 4
Peptidase_C3 PF00548 3C cysteine protease (picornain 3C) 1 31 60
Peptidase_C30 PF05409 Coronavirus endopeptidase C30 1 45 97
Peptidase_C31 PF05410 Porcine arterivirus-type cysteine proteinase alpha 0 1 1
Peptidase_C32 PF05411 Equine arteritis virus putative proteinase 0 0 1
Peptidase_C33 PF05412 Equine arterivirus Nsp2-type cysteine proteinase 1 3 1
Peptidase_C34 PF05413 Putative closterovirus papain-like endopeptidase 0 0 0
Peptidase_C36 PF05415 Beet necrotic yellow vein furovirus-type papain-like endopeptidase 0 0 0
Peptidase_C37 PF05416 Southampton virus-type processing peptidase 1 13 14
Peptidase_C39 PF03412 Peptidase C39 family 0 1 3
Peptidase_C39_2 PF13529 Peptidase_C39 like family 0 1 1
Peptidase_C3G PF12381 Tungro spherical virus-type peptidase 0 0 0
Peptidase_C4 PF00863 Peptidase family C4 1 4 4
Peptidase_C41 PF05417 Hepatitis E cysteine protease 0 0 0
Peptidase_C42 PF05533 Beet yellows virus-type papain-like endopeptidase C42 0 0 0
Peptidase_C47 PF05543 Staphopain peptidase C47 3 5 4
Peptidase_C48 PF02902 Ulp1 protease family, C-terminal catalytic domain 4 7 25
Peptidase_C5 PF00770 Adenovirus endoprotease 1 3 3
Peptidase_C50 PF03568 Peptidase family C50 0 0 0
Peptidase_C53 PF05550 Pestivirus Npro endopeptidase C53 0 6 7
Peptidase_C54 PF03416 Peptidase family C54 2 2 6
Peptidase_C57 PF03290 Vaccinia virus I7 processing peptidase 0 0 0
Peptidase_C58 PF03543 Yersinia/Haemophilus virulence surface antigen 0 0 1
Peptidase_C6 PF00851 Helper component proteinase 0 0 1
Peptidase_C62 PF12380 Gill-associated viral 3C-like peptidase 0 0 0
Peptidase_C65 PF10275 Peptidase C65 Otubain 3 5 11
Peptidase_C69 PF03577 Peptidase family C69 0 0 0
Peptidase_C7 PF01830 Peptidase C7 family 0 0 0
Peptidase_C70 PF12385 Papain-like cysteine protease AvrRpt2 0 0 0
Peptidase_C71 PF12386 Pseudomurein endo-isopeptidase Pei 0 0 0
Peptidase_C74 PF12387 Pestivirus NS2 peptidase 0 0 0
Peptidase_C78 PF07910 Peptidase family C78 0 0 2
Peptidase_C8 PF03569 Peptidase family C8 0 0 0
Peptidase_C80 PF11713 Peptidase C80 family 1 6 6
Peptidase_C9 PF01707 Peptidase family C9 0 5 3
Peptidase_C93 PF06035 Bacterial transglutaminase-like cysteine proteinase BTLCP 1 2 3
Peptidase_C97 PF05903 PPPDE putative peptidase domain 0 1 2
Peptidase_C98 PF15499 Ubiquitin-specific peptidase-like, SUMO isopeptidase 0 0 0
Peptidase_G2 PF11962 Peptidase_G2, IMC autoproteolytic cleavage domain 1 2 7
Peptidase_M1 PF01433 Peptidase family M1 6 76 99
Peptidase_M10 PF00413 Matrixin 8 171 222
Peptidase_M10_C PF08548 Peptidase M10 serralysin C terminal 4 2 26
Peptidase_M11 PF05548 Gametolysin peptidase M11 0 0 0
Peptidase_M13 PF01431 Peptidase family M13 2 18 10
Peptidase_M13_N PF05649 Peptidase family M13 1 10 10
Peptidase_M14 PF00246 Zinc carboxypeptidase 9 74 99
Peptidase_M15 PF01427 D-ala-D-ala dipeptidase 1 1 1
Peptidase_M15_2 PF05951 Bacterial protein of unknown function (DUF882) 0 0 0
Peptidase_M15_3 PF08291 Peptidase M15 1 1 1
Peptidase_M15_4 PF13539 D-alanyl-D-alanine carboxypeptidase 0 0 0
Peptidase_M16 PF00675 Insulinase (Peptidase family M16) 12 19 81
Peptidase_M16_C PF05193 Peptidase M16 inactive domain 16 19 85
Peptidase_M17 PF00883 Cytosol aminopeptidase family, catalytic domain 2 33 27
Peptidase_M17_N PF02789 Cytosol aminopeptidase family, N-terminal domain 2 5 17
Peptidase_M18 PF02127 Aminopeptidase I zinc metalloprotease (M18) 1 6 8
Peptidase_M19 PF01244 Membrane dipeptidase (Peptidase family M19) 1 18 17
Peptidase_M2 PF01401 Angiotensin-converting enzyme 3 34 48
Peptidase_M20 PF01546 Peptidase family M20/M25/M40 2 36 46
Peptidase_M22 PF00814 Glycoprotease family 4 17 16
Peptidase_M23 PF01551 Peptidase family M23 3 11 13
Peptidase_M24 PF00557 Metallopeptidase family M24 10 101 157
Peptidase_M26_C PF07580 M26 IgA1-specific Metallo-endopeptidase C-terminal region 0 0 0
Peptidase_M26_N PF05342 M26 IgA1-specific Metallo-endopeptidase N-terminal region 0 0 0
Peptidase_M27 PF01742 Clostridial neurotoxin zinc protease 6 37 87
Peptidase_M28 PF04389 Peptidase family M28 3 64 112
Peptidase_M29 PF02073 Thermophilic metalloprotease (M29) 1 2 2
Peptidase_M3 PF01432 Peptidase family M3 2 7 9
Peptidase_M30 PF10460 Peptidase M30 0 0 0
Peptidase_M32 PF02074 Carboxypeptidase Taq (M32) metallopeptidase 1 12 7
Peptidase_M35 PF02102 Deuterolysin metalloprotease (M35) family 0 2 1
Peptidase_M36 PF02128 Fungalysin metallopeptidase (M36) 0 0 0
Peptidase_M3_N PF08439 Oligopeptidase F 2 0 2
Peptidase_M4 PF01447 Thermolysin metallopeptidase, catalytic domain 3 88 124
Peptidase_M41 PF01434 Peptidase family M41 2 3 14
Peptidase_M42 PF05343 M42 glutamyl aminopeptidase 1 9 15
Peptidase_M43 PF05572 Pregnancy-associated plasma protein-A 1 8 4
Peptidase_M44 PF03410 Protein G1 0 0 0
Peptidase_M48 PF01435 Peptidase family M48 1 6 5
Peptidase_M49 PF03571 Peptidase family M49 1 3 4
Peptidase_M4_C PF02868 Thermolysin metallopeptidase, alpha-helical domain 5 56 125
Peptidase_M50 PF02163 Peptidase family M50 2 6 8
Peptidase_M50B PF13398 Peptidase M50B-like 0 0 0
Peptidase_M54 PF07998 Peptidase family M54 0 5 5
Peptidase_M55 PF04951 D-aminopeptidase 1 1 1
Peptidase_M56 PF05569 BlaR1 peptidase M56 0 0 0
Peptidase_M57 PF12388 Dual-action HEIGH metallo-peptidase 0 0 0
Peptidase_M6 PF05547 Immune inhibitor A peptidase M6 0 0 0
Peptidase_M61 PF05299 M61 glycyl aminopeptidase 1 0 1
Peptidase_M64 PF09471 IgA Peptidase M64 1 9 2
Peptidase_M66 PF10462 Peptidase M66 0 2 1
Peptidase_M7 PF02031 Streptomyces extracellular neutral proteinase (M7) family 1 2 3
Peptidase_M73 PF12389 Camelysin metallo-endopeptidase 0 0 0
Peptidase_M74 PF03411 Penicillin-insensitive murein endopeptidase 1 4 2
Peptidase_M75 PF09375 Imelysin 1 9 6
Peptidase_M76 PF09768 Peptidase M76 family 0 0 0
Peptidase_M8 PF01457 Leishmanolysin 0 1 1
Peptidase_M85 PF13678 NFkB-p65-degrading zinc protease 0 0 0
Peptidase_M9 PF01752 Collagenase 1 7 8
Peptidase_M90 PF06167 Glucose-regulated metallo-peptidase M90 0 4 2
Peptidase_M91 PF14891 Effector protein 0 0 0
Peptidase_M9_N PF08453 Peptidase family M9 N-terminal 1 4 4
Peptidase_MA_2 PF13485 Peptidase MA superfamily 0 0 0
Peptidase_S10 PF00450 Serine carboxypeptidase 2 18 13
Peptidase_S11 PF00768 D-alanyl-D-alanine carboxypeptidase 3 21 29
Peptidase_S13 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family 1 34 31
Peptidase_S15 PF02129 X-Pro dipeptidyl-peptidase (S15 family) 3 12 21
Peptidase_S21 PF00716 Assemblin (Peptidase family S21) 1 14 21
Peptidase_S24 PF00717 Peptidase S24-like 2 7 21
Peptidase_S26 PF10502 Signal peptidase, peptidase S26 2 3 6
Peptidase_S28 PF05577 Serine carboxypeptidase S28 1 6 4
Peptidase_S29 PF02907 Hepatitis C virus NS3 protease 5 55 89
Peptidase_S3 PF00944 Alphavirus core protein 3 6 24
Peptidase_S30 PF01577 Potyvirus P1 protease 0 0 0
Peptidase_S31 PF05578 Pestivirus NS3 polyprotein peptidase S31 0 0 0
Peptidase_S32 PF05579 Equine arteritis virus serine endopeptidase S32 1 1 4
Peptidase_S37 PF05576 PS-10 peptidase S37 0 0 0
Peptidase_S39 PF02122 Peptidase S39 0 1 1
Peptidase_S41 PF03572 Peptidase family S41 5 10 16
Peptidase_S46 PF10459 Peptidase S46 0 0 0
Peptidase_S48 PF03574 Peptidase family S48 1 1 5
Peptidase_S49 PF01343 Peptidase family S49 1 1 3
Peptidase_S49_N PF08496 Peptidase family S49 N-terminal 0 0 0
Peptidase_S51 PF03575 Peptidase family S51 1 2 4
Peptidase_S55 PF05580 SpoIVB peptidase S55 0 0 0
Peptidase_S58 PF03576 Peptidase family S58 1 9 11
Peptidase_S6 PF02395 Immunoglobulin A1 protease 2 4 5
Peptidase_S64 PF08192 Peptidase family S64 0 0 0
Peptidase_S66 PF02016 LD-carboxypeptidase 1 16 23
Peptidase_S68 PF10461 Peptidase S68 0 0 0
Peptidase_S7 PF00949 Peptidase S7, Flavivirus NS3 serine protease 4 7 14
Peptidase_S74 PF13884 Chaperone of endosialidase 0 2 1
Peptidase_S76 PF13611 Serine peptidase of plant viral polyprotein, P1 0 0 0
Peptidase_S8 PF00082 Subtilase family 16 81 281
Peptidase_S80 PF07230 Bacteriophage T4-like capsid assembly protein (Gp20) 0 0 0
Peptidase_S9 PF00326 Prolyl oligopeptidase family 5 82 165
Peptidase_S9_N PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain 2 28 42
Peptidase_U32 PF01136 Peptidase family U32 0 0 0
Peptidase_U35 PF04586 Caudovirus prohead protease 0 0 0
Peptidase_U35_2 PF14550 Putative phage protease XkdF 0 0 0
Peptidase_U4 PF03419 Sporulation factor SpoIIGA 0 0 0
Peptidase_U40 PF10464 Peptidase U40 0 2 3
Peptidase_U49 PF10463 Peptidase U49 0 0 0
Peptidase_U57 PF05582 YabG peptidase U57 0 0 0
Peptidase_U9 PF03420 Prohead core protein protease 0 0 0
Pept_tRNA_hydro PF01195 Peptidyl-tRNA hydrolase 1 15 34
PepX_C PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain 3 5 21
PepX_N PF09168 X-Prolyl dipeptidyl aminopeptidase PepX, N-terminal 2 0 1
Pep_deformylase PF01327 Polypeptide deformylase 2 56 100
Pep_M12B_propep PF01562 Reprolysin family propeptide 0 0 0
PEP_mutase PF13714 Phosphoenolpyruvate phosphomutase 1 21 28
Per1 PF04080 Per1-like 0 0 0
PerB PF06590 PerB protein 0 0 0
PerC PF06069 PerC transcriptional activator 0 0 0
Pericardin_rpt PF07054 Pericardin like repeat 0 0 0
Perilipin PF03036 Perilipin family 0 0 1
Period_C PF12114 Period protein 2/3C-terminal region 0 0 0
Peripla_BP_1 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 2 11 18
Peripla_BP_2 PF01497 Periplasmic binding protein 2 36 53
Peripla_BP_3 PF13377 Periplasmic binding protein-like domain 3 26 84
Peripla_BP_4 PF13407 Periplasmic binding protein domain 2 30 60
Peripla_BP_5 PF13433 Periplasmic binding protein domain 1 2 3
Peripla_BP_6 PF13458 Periplasmic binding protein 1 41 44
Periviscerokin PF08259 Periviscerokinin family 0 0 0
Perm-CXXC PF15629 Permuted single zf-CXXC unit 0 0 0
Permease PF02405 Permease 0 0 0
peroxidase PF00141 Peroxidase 3 122 331
Peroxidase_2 PF01328 Peroxidase, family 2 0 0 13
Peroxin-13_N PF04088 Peroxin 13, N-terminal region 0 0 0
Peroxin-22 PF12827 Peroxisomal biogenesis protein family 1 1 3
Peroxin-3 PF04882 Peroxin-3 1 0 2
Pertactin PF03212 Pertactin 2 0 5
Pertus-S4-tox PF09275 Pertussis toxin S4 subunit 5 1 3
Pertus-S5-tox PF09276 Pertussis toxin S5 subunit 3 1 3
Pertussis_S1 PF02917 Pertussis toxin, subunit 1 4 1 4
Pertussis_S2S3 PF02918 Pertussis toxin, subunit 2 and 3, C-terminal domain 5 4 4
Pes-10 PF07149 Pes-10 0 0 0
Pescadillo_N PF06732 Pescadillo N-terminus 0 0 0
PET PF06297 PET Domain 0 0 0
PET122 PF05476 PET122 0 0 0
Pet127 PF08634 Mitochondrial protein Pet127 0 0 0
Pet191_N PF10203 Cytochrome c oxidase assembly protein PET191 0 0 0
Pet20 PF08692 Mitochondrial protein Pet20 0 0 0
PetG PF02529 Cytochrome B6-F complex subunit 5 5 7 10
PetL PF05115 Cytochrome B6-F complex subunit VI (PetL) 4 2 3
PetM PF08041 PetM family of cytochrome b6f complex subunit 7 5 5 10
PetN PF03742 PetN 4 3 6
PEX-1N PF09262 Peroxisome biogenesis factor 1, N-terminal 1 0 1
PEX-2N PF09263 Peroxisome biogenesis factor 1, N-terminal 1 1 1
PEX11 PF05648 Peroxisomal biogenesis factor 11 (PEX11) 0 0 0
Pex14_N PF04695 Peroxisomal membrane anchor protein (Pex14p) conserved region 2 1 3
Pex16 PF08610 Peroxisomal membrane protein (Pex16) 0 0 0
Pex19 PF04614 Pex19 protein family 2 0 2
Pex24p PF06398 Integral peroxisomal membrane peroxin 0 0 1
Pex26 PF07163 Pex26 protein 0 0 0
Pex2_Pex12 PF04757 Pex2 / Pex12 amino terminal region 0 0 0
PE_PPE_C PF12484 Polymorphic PE/PPE proteins C terminal 0 0 0
PFEMP PF03011 PFEMP DBL domain 1 4 3
Pfg27 PF09216 Pfg27 0 0 1
PFK PF00365 Phosphofructokinase 1 14 22
PfkB PF00294 pfkB family carbohydrate kinase 1 76 154
PFL PF02901 Pyruvate formate lyase 2 14 14
PFO_beta_C PF12367 Pyruvate ferredoxin oxidoreductase beta subunit C terminal 0 0 0
PFU PF09070 PFU (PLAA family ubiquitin binding) 2 1 7
PfUIS3 PF11567 Plasmodium falciparum UIS3 membrane protein 1 2 1
Pga1 PF10333 GPI-Mannosyltransferase II co-activator 0 0 0
PGA2 PF07543 Protein trafficking PGA2 0 0 0
PgaD PF13994 PgaD-like protein 0 0 0
PGAMP PF07644 Planctomycete PGAMP 0 0 0
PGAP1 PF07819 PGAP1-like protein 0 0 0
PGA_cap PF09587 Bacterial capsule synthesis protein PGA_cap 0 0 0
PGBA_C PF15437 Plasminogen-binding protein pgbA C-terminal 0 0 0
PGBA_N PF15436 Plasminogen-binding protein pgbA N-terminal 0 0 0
PGC7_Stella PF15549 PGC7/Stella/Dppa3 domain 0 0 0
PGDYG PF14083 PGDYG protein 0 0 0
PGG PF13962 Domain of unknown function 0 0 0
PGI PF00342 Phosphoglucose isomerase 1 29 49
PGK PF00162 Phosphoglycerate kinase 1 28 43
PglZ PF08665 PglZ domain 0 0 0
PGM_PMM_I PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 4 24 37
PGM_PMM_II PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 4 19 37
PGM_PMM_III PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 3 14 33
PGM_PMM_IV PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 3 16 38
PgpA PF04608 Phosphatidylglycerophosphatase A 1 5 3
PGPGW PF09656 Putative transmembrane protein (PGPGW) 0 0 0
PGP_phosphatase PF09419 Mitochondrial PGP phosphatase 0 0 0
PG_binding_1 PF01471 Putative peptidoglycan binding domain 6 2 13
PG_binding_2 PF08823 Putative peptidoglycan binding domain 0 0 0
PG_binding_3 PF09374 Predicted Peptidoglycan domain 2 2 3
PG_binding_4 PF12229 Putative peptidoglycan binding domain 2 1 2
PH PF00169 PH domain 17 27 150
Ph1570 PF09638 Ph1570 protein 1 0 1
PHA-1 PF06542 Regulator protein PHA-1 0 0 0
PhaC_N PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus 0 0 0
Phage-A118_gp45 PF10653 Protein gp45 of Bacteriophage A118 0 0 0
Phage-Gp8 PF09215 Bacteriophage T4, Gp8 1 3 5
Phage-MuB_C PF09077 Mu B transposition protein, C terminal 0 0 1
Phage-scaffold PF09306 Bacteriophage, scaffolding protein 0 0 2
Phage-tail_1 PF09097 Baseplate structural protein, domain 1 2 1 4
Phage-tail_2 PF09096 Baseplate structural protein, domain 2 2 1 4
Phage-tail_3 PF13550 Putative phage tail protein 0 0 0
PhageMin_Tail PF10145 Phage-related minor tail protein 0 0 0
PhageP22-tail PF09251 Salmonella phage P22 tail-spike 2 12 23
Phageshock_PspD PF09584 Phage shock protein PspD (Phageshock_PspD) 0 0 0
Phageshock_PspG PF09583 Phage shock protein G (Phageshock_PspG) 0 0 0
Phage_1_1 PF08200 Bacteriophage 1.1 Protein 0 0 0
Phage_30_3 PF08010 Bacteriophage protein GP30.3 0 0 0
Phage_30_8 PF06019 Phage GP30.8 protein 0 0 0
Phage_AlpA PF05930 Prophage CP4-57 regulatory protein (AlpA) 0 0 1
Phage_antitermQ PF06530 Phage antitermination protein Q 0 0 0
Phage_antiter_Q PF06323 Phage antitermination protein Q 0 0 0
Phage_ASH PF10554 Ash protein family 0 0 0
Phage_attach PF05354 Phage Head-Tail Attachment 0 0 2
Phage_B PF02304 Scaffold protein B 1 0 3
Phage_base_V PF04717 Phage-related baseplate assembly protein 1 3 3
Phage_BR0599 PF09356 Phage conserved hypothetical protein BR0599 0 0 0
Phage_C PF12025 Phage protein C 0 0 0
Phage_capsid PF05065 Phage capsid family 1 2 12
Phage_Capsid_P3 PF09018 P3 major capsid protein 4 4 9
Phage_cap_E PF03864 Phage major capsid protein E 0 0 1
Phage_cap_P2 PF05125 Phage major capsid protein, P2 family 0 0 0
Phage_CII PF05269 Bacteriophage CII protein 1 1 3
Phage_CI_repr PF07022 Bacteriophage CI repressor helix-turn-helix domain 0 0 1
Phage_coat PF09063 Phage PP7 coat protein 1 1 3
Phage_Coat_A PF05357 Phage Coat Protein A 2 3 9
Phage_Coat_B PF05356 Phage Coat protein B 1 0 14
Phage_Coat_Gp8 PF05371 Phage major coat protein, Gp8 0 0 13
Phage_connector PF05352 Phage Connector (GP10) 1 1 4
Phage_connect_1 PF05135 Phage gp6-like head-tail connector protein 1 3 2
Phage_Cox PF10743 Regulatory phage protein cox 0 0 0
Phage_CP76 PF06892 Phage regulatory protein CII (CP76) 0 0 0
Phage_CRI PF05144 Phage replication protein CRI 0 0 0
Phage_DNA_bind PF02303 Helix-destabilising protein 1 0 19
Phage_DsbA PF11126 Transcriptional regulator DsbA 0 0 0
Phage_endo_I PF05367 Phage endonuclease I 1 3 5
Phage_F PF02305 Capsid protein (F protein) 5 2 8
Phage_fiber PF03335 Phage tail fibre repeat 1 2 1
Phage_fiber_2 PF03406 Phage tail fibre repeat 0 0 0
Phage_fiber_C PF06820 Putative prophage tail fibre C-terminus 0 0 0
Phage_FRD3 PF05798 Bacteriophage FRD3 protein 0 0 0
Phage_G PF02306 Major spike protein (G protein) 2 0 7
Phage_glycop_gL PF11108 Viral glycoprotein L 2 0 1
Phage_Gp111 PF07410 Streptococcus thermophilus bacteriophage Gp111 protein 0 0 0
Phage_Gp14 PF10666 Phage protein Gp14 0 0 0
Phage_Gp15 PF06854 Bacteriophage Gp15 protein 0 0 0
Phage_Gp19 PF09355 Phage protein Gp19/Gp15/Gp42 0 0 0
Phage_GP20 PF06810 Phage minor structural protein GP20 0 0 0
Phage_Gp23 PF10669 Protein gp23 (Bacteriophage A118) 0 0 0
Phage_gp49_66 PF13876 Phage protein (N4 Gp49/phage Sf6 gene 66) family 0 0 0
Phage_gp53 PF11246 Base plate wedge protein 53 0 0 0
Phage_GPA PF05840 Bacteriophage replication gene A protein (GPA) 0 0 0
Phage_GPD PF05954 Phage late control gene D protein (GPD) 2 2 4
Phage_GPL PF05926 Phage head completion protein (GPL) 0 0 0
Phage_GPO PF05929 Phage capsid scaffolding protein (GPO) serine peptidase 0 0 0
Phage_head_chap PF11113 Head assembly gene product 0 0 0
Phage_head_fibr PF11133 Head fiber protein 0 0 1
Phage_HK97_TLTM PF06120 Tail length tape measure protein 0 0 0
Phage_holin PF04688 Phage lysis protein, holin 0 0 0
Phage_holin_1 PF04531 Bacteriophage holin 0 0 0
Phage_holin_2 PF04550 Phage holin family 2 0 0 0
Phage_holin_3 PF05106 Phage holin family (Lysis protein S) 0 0 0
Phage_holin_4 PF05105 Holin family 0 0 0
Phage_holin_5 PF06946 Phage holin 0 0 0
Phage_holin_6 PF10746 Phage holin family 6 0 0 0
Phage_holin_T PF11031 Bacteriophage T holin 0 0 0
Phage_hub_GP28 PF11110 Baseplate hub distal subunit 0 0 0
Phage_H_T_join PF05521 Phage head-tail joining protein 0 0 2
Phage_integrase PF00589 Phage integrase family 3 14 33
Phage_Integr_2 PF13009 Putative phage integrase 0 0 0
Phage_integ_N PF09003 Bacteriophage lambda integrase, N-terminal domain 2 0 4
Phage_int_SAM_1 PF02899 Phage integrase, N-terminal SAM-like domain 3 2 8
Phage_int_SAM_2 PF12834 Phage integrase, N-terminal 0 0 0
Phage_int_SAM_3 PF14659 Phage integrase, N-terminal SAM-like domain 1 1 6
Phage_int_SAM_4 PF13495 Phage integrase, N-terminal SAM-like domain 2 0 1
Phage_int_SAM_5 PF13102 Phage integrase SAM-like domain 0 0 1
Phage_lambda_P PF06992 Replication protein P 0 0 0
Phage_lambd_GpG PF06894 Bacteriophage lambda minor tail protein (GpG) 0 0 0
Phage_lysis PF03245 Bacteriophage Rz lysis protein 0 0 0
Phage_lysozyme PF00959 Phage lysozyme 5 123 589
Phage_mat-A PF03863 Phage maturation protein 0 0 0
Phage_min_cap2 PF06152 Phage minor capsid protein 2 0 0 0
Phage_min_tail PF05939 Phage minor tail protein 0 0 0
Phage_Mu_F PF04233 Phage Mu protein F like protein 0 0 0
Phage_Mu_Gam PF07352 Bacteriophage Mu Gam like protein 0 1 1
Phage_Mu_Gp45 PF06890 Bacteriophage Mu Gp45 protein 0 4 2
Phage_NinH PF06322 Phage NinH protein 0 0 0
Phage_Nu1 PF07471 Phage DNA packaging protein Nu1 1 0 1
Phage_Orf51 PF06194 Phage Conserved Open Reading Frame 51 0 0 0
Phage_P2_GpE PF06528 Phage P2 GpE 0 0 0
Phage_P2_GpU PF06995 Phage P2 GpU 0 0 0
Phage_portal PF04860 Phage portal protein 1 4 1
Phage_portal_2 PF05136 Phage portal protein, lambda family 0 0 0
Phage_pRha PF09669 Phage regulatory protein Rha (Phage_pRha) 0 0 0
Phage_prot_Gp6 PF05133 Phage portal protein, SPP1 Gp6-like 1 2 1
Phage_rep_O PF04492 Bacteriophage replication protein O 0 0 0
Phage_rep_org_N PF09681 N-terminal phage replisome organiser (Phage_rep_org_N) 0 0 0
Phage_RpbA PF10789 Phage RNA polymerase binding, RpbA 0 0 0
Phage_sheath_1 PF04984 Phage tail sheath protein 1 2 8
Phage_stabilise PF11134 Phage stabilisation protein 0 0 0
Phage_T4_gp19 PF06841 T4-like virus tail tube protein gp19 0 0 0
Phage_T4_Gp30_7 PF06919 Phage Gp30.7 protein 0 0 0
Phage_T4_gp36 PF03903 Phage T4 tail fibre 0 0 0
Phage_T4_Ndd PF06591 T4-like phage nuclear disruption protein (Ndd) 0 0 0
Phage_T7_Capsid PF05396 Phage T7 capsid assembly protein 0 0 0
Phage_T7_tail PF03906 Phage T7 tail fibre protein 0 0 0
Phage_TAC PF06222 Phage tail assembly chaperone 1 1 1
Phage_tail PF04630 Phage major tail protein 0 0 0
Phage_tail_2 PF06199 Phage major tail protein 2 0 0 0
Phage_tail_3 PF08813 Phage tail protein 0 0 0
Phage_tail_L PF05100 Phage minor tail protein L 0 0 0
phage_tail_N PF08400 Prophage tail fibre N-terminal 0 0 0
Phage_tail_S PF05069 Phage virion morphogenesis family 0 0 0
Phage_tail_T PF06223 Minor tail protein T 0 0 0
Phage_tail_U PF06141 Phage minor tail protein U 1 2 3
Phage_tail_X PF05489 Phage Tail Protein X 0 0 1
Phage_terminase PF10668 Phage terminase small subunit 0 0 0
Phage_term_sma PF07141 Putative bacteriophage terminase small subunit 0 0 0
Phage_term_smal PF05944 Phage small terminase subunit 0 0 0
Phage_Treg PF04761 Lactococcus bacteriophage putative transcription regulator 0 0 0
Phage_tube PF04985 Phage tail tube protein FII 0 0 0
Phage_X PF05155 Phage X family 0 0 0
Phage_XkdX PF09693 Phage uncharacterised protein (Phage_XkdX) 0 0 0
PhaG_MnhG_YufB PF03334 Na+/H+ antiporter subunit 0 0 0
PhaP_Bmeg PF09602 Polyhydroxyalkanoic acid inclusion protein (PhaP_Bmeg) 0 0 0
Phasin PF05597 Poly(hydroxyalcanoate) granule associated protein (phasin) 0 0 0
Phasin_2 PF09361 Phasin protein 0 0 0
PHAT PF09246 PHAT 1 0 1
PHA_gran_rgn PF09650 Putative polyhydroxyalkanoic acid system protein (PHA_gran_rgn) 0 0 0
PHA_synth_III_E PF09712 Poly(R)-hydroxyalkanoic acid synthase subunit (PHA_synth_III_E) 0 0 0
PHBC_N PF12551 Poly-beta-hydroxybutyrate polymerase N terminal 0 0 0
PHB_acc PF05233 PHB accumulation regulatory domain 0 0 0
PHB_acc_N PF07879 PHB/PHA accumulation regulator DNA-binding domain 0 0 0
PHB_depo_C PF06850 PHB de-polymerase C-terminus 0 0 0
PHD PF00628 PHD-finger 4 18 101
PhdYeFM_antitox PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 5 12 12
PHD_2 PF13831 PHD-finger 0 1 2
PHD_3 PF13922 PHD domain of transcriptional enhancer, Asx 0 0 0
Phenol_Hydrox PF02332 Methane/Phenol/Toluene Hydroxylase 4 42 63
Phenol_hyd_sub PF06099 Phenol hydroxylase subunit 0 0 0
Phenol_MetA_deg PF13557 Putative MetA-pathway of phenol degradation 0 0 0
Phenol_monoox PF04663 Phenol hydroxylase conserved region 1 1 3
Phenyl_P_gamma PF09662 Phenylphosphate carboxylase gamma subunit (Phenyl_P_gamma) 0 0 0
Pheromone PF08015 Fungal mating-type pheromone 0 0 0
Phe_hydrox_dim PF07976 Phenol hydroxylase, C-terminal dimerisation domain 2 2 4
Phe_tRNA-synt_N PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain 1 0 5
Phe_ZIP PF08916 Phenylalanine zipper 1 0 1
PHF5 PF03660 PHF5-like protein 0 1 1
Phg_2220_C PF09524 Conserved phage C-terminus (Phg_2220_C) 0 0 0
Phi-29_GP16_7 PF06720 Bacteriophage phi-29 early protein GP16.7 1 0 3
Phi-29_GP3 PF05435 Phi-29 DNA terminal protein GP3 1 0 1
Phi-29_GP4 PF05464 Phi-29-like late genes activator (early protein GP4) 1 0 2
phiKZ_IP PF12699 phiKZ-like phage internal head proteins 0 0 0
Phi_1 PF04674 Phosphate-induced protein 1 conserved region 0 0 0
Phlebovirus_G1 PF07243 Phlebovirus glycoprotein G1 0 0 0
Phlebovirus_G2 PF07245 Phlebovirus glycoprotein G2 0 4 2
Phlebovirus_NSM PF07246 Phlebovirus nonstructural protein NS-M 0 0 0
PhnA PF03831 PhnA protein 0 0 2
PhnA_Zn_Ribbon PF08274 PhnA Zinc-Ribbon 0 1 1
PhnG PF06754 Phosphonate metabolism protein PhnG 0 0 0
PhnH PF05845 Bacterial phosphonate metabolism protein (PhnH) 0 3 1
PhnI PF05861 Bacterial phosphonate metabolism protein (PhnI) 0 0 0
PhnJ PF06007 Phosphonate metabolism protein PhnJ 0 0 0
PHO4 PF01384 Phosphate transporter family 0 0 0
Pho86 PF11124 Inorganic phosphate transporter Pho86 0 0 0
Pho88 PF10032 Phosphate transport (Pho88) 0 0 0
PhoD PF09423 PhoD-like phosphatase 1 6 1
PhoH PF02562 PhoH-like protein 1 2 1
PhoPQ_related PF10142 PhoPQ-activated pathogenicity-related protein 0 0 0
PhoQ_Sensor PF08918 PhoQ Sensor 1 5 3
Phosducin PF02114 Phosducin 2 4 6
PhosphMutase PF10143 2,3-bisphosphoglycerate-independent phosphoglycerate mutase 1 2 3
Phosphodiest PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase 3 32 28
Phosphoesterase PF04185 Phosphoesterase family 1 5 1
Phospholamban PF04272 Phospholamban 2 2 11
Phospholip_A2_1 PF00068 Phospholipase A2 3 100 269
Phospholip_A2_2 PF05826 Phospholipase A2 0 2 1
Phospholip_A2_3 PF09056 Prokaryotic phospholipase A2 0 3 6
Phospholip_B PF04916 Phospholipase B 1 9 4
Phosphonate-bd PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein 1 7 5
Phosphoprotein PF00922 Vesiculovirus phosphoprotein 2 2 5
Phosphorylase PF00343 Carbohydrate phosphorylase 1 155 193
Phospho_p8 PF10195 DNA-binding nuclear phosphoprotein p8 0 0 0
Phostensin PF13914 Phostensin PP1-binding and SH3-binding region 0 0 0
Phostensin_N PF13916 PP1-regulatory protein, Phostensin N-terminal 0 0 0
Phos_pyr_kin PF08543 Phosphomethylpyrimidine kinase 2 19 19
Photo_RC PF00124 Photosynthetic reaction centre protein 17 78 125
PhoU PF01895 PhoU domain 2 10 9
PhoU_div PF01865 Protein of unknown function DUF47 1 5 3
PHP PF02811 PHP domain 7 19 40
PHP_C PF13263 PHP-associated 1 4 4
PHR PF08005 PHR domain 1 4 3
PhrC_PhrF PF11131 Rap-phr extracellular signalling 0 0 0
PHTB1_C PF14728 PTHB1 C-terminus 0 0 0
PHTB1_N PF14727 PTHB1 N-terminus 0 0 0
Phtf-FEM1B_bdg PF12129 Male germ-cell putative homeodomain transcription factor 0 0 0
PHY PF00360 Phytochrome region 3 3 10
Phycobilisome PF00502 Phycobilisome protein 3 13 45
Phycoerythr_ab PF02972 Phycoerythrin, alpha/beta chain 2 3 3
PhyH PF05721 Phytanoyl-CoA dioxygenase (PhyH) 1 13 17
Phytase PF02333 Phytase 0 5 7
Phytase-like PF13449 Esterase-like activity of phytase 0 0 0
Phyto-Amp PF15438 Antigenic membrane protein of phytoplasma 0 0 0
Phytochelatin PF05023 Phytochelatin synthase 1 4 2
Phytochelatin_C PF09328 Domain of unknown function (DUF1984) 0 0 0
Phytoreo_P8 PF07124 Phytoreovirus outer capsid protein P8 2 0 1
Phytoreo_Pns PF05451 Phytoreovirus nonstructural protein Pns10/11 0 0 0
Phytoreo_S7 PF07236 Phytoreovirus S7 protein 1 0 1
Phyto_Pns9_10 PF05878 Phytoreovirus nonstructural protein Pns9/Pns10 0 0 0
PHZA_PHZB PF03284 Phenazine biosynthesis protein A/B 1 11 11
PhzC-PhzF PF02567 Phenazine biosynthesis-like protein 1 9 14
PH_10 PF15411 Pleckstrin homology domain 0 0 0
PH_11 PF15413 Pleckstrin homology domain 1 3 4
PH_2 PF08458 Plant pleckstrin homology-like region 0 0 0
PH_3 PF14593 PH domain 1 5 4
PH_4 PF15404 Pleckstrin homology domain 0 0 0
PH_5 PF15405 Pleckstrin homology domain 1 1 1
PH_6 PF15406 Pleckstrin homology domain 0 0 0
PH_7 PF15408 Pleckstrin homology domain 0 0 0
PH_8 PF15409 Pleckstrin homology domain 0 1 1
PH_9 PF15410 Pleckstrin homology domain 0 1 3
PH_BEACH PF14844 PH domain associated with Beige/BEACH 1 1 2
PI-PLC-X PF00388 Phosphatidylinositol-specific phospholipase C, X domain 4 17 43
PI-PLC-Y PF00387 Phosphatidylinositol-specific phospholipase C, Y domain 4 6 16
PI31_Prot_C PF08577 PI31 proteasome regulator 0 0 0
PI31_Prot_N PF11566 PI31 proteasome regulator N-terminal 1 1 1
PI3Ka PF00613 Phosphoinositide 3-kinase family, accessory domain (PIK domain) 6 2 101
PI3K_1B_p101 PF10486 Phosphoinositide 3-kinase gamma adapter protein p101 subunit 0 0 0
PI3K_C2 PF00792 Phosphoinositide 3-kinase C2 3 1 94
PI3K_p85B PF02192 PI3-kinase family, p85-binding domain 0 0 6
PI3K_rbd PF00794 PI3-kinase family, ras-binding domain 4 1 93
PI3_PI4_kinase PF00454 Phosphatidylinositol 3- and 4-kinase 10 81 106
Picorna_P3A PF06363 Picornaviridae P3A protein 0 0 0
Pico_P1A PF02226 Picornavirus coat protein (VP4) 1 4 95
Pico_P2A PF00947 Picornavirus core protein 2A 1 1 4
Pico_P2B PF01552 Picornavirus 2B protein 0 0 0
PID PF00640 Phosphotyrosine interaction domain (PTB/PID) 4 11 34
PID_2 PF14719 Phosphotyrosine interaction domain (PTB/PID) 0 0 0
PIF PF05092 Per os infectivity 0 0 0
PIF1 PF05970 PIF1-like helicase 0 0 0
PIG-F PF06699 GPI biosynthesis protein family Pig-F 0 0 0
PIG-H PF10181 GPI-GlcNAc transferase complex, PIG-H component 0 0 0
PIG-L PF02585 GlcNAc-PI de-N-acetylase 1 16 11
PIG-P PF08510 PIG-P 0 0 0
PIG-S PF10510 Phosphatidylinositol-glycan biosynthesis class S protein 0 0 0
PIG-U PF06728 GPI transamidase subunit PIG-U 0 0 0
PIG-X PF08320 PIG-X / PBN1 0 0 0
PIG-Y PF15159 Phosphatidylinositol N-acetylglucosaminyltransferase subunit Y 0 0 0
PIGA PF08288 PIGA (GPI anchor biosynthesis) 0 0 0
Pigment_DH PF06324 Pigment-dispersing hormone (PDH) 0 0 0
PigN PF04987 Phosphatidylinositolglycan class N (PIG-N) 0 0 0
PIH1 PF08190 pre-RNA processing PIH1/Nop17 0 0 0
Pik1 PF11522 Yeast phosphatidylinositol-4-OH kinase Pik1 2 0 1
Pil1 PF13805 Eisosome component PIL1 1 0 1
PilI PF10623 Plasmid conjugative transfer protein PilI 0 0 0
Pilin PF00114 Pilin (bacterial filament) 2 2 27
Pilin_PilA PF14245 Type IV pilin PilA 0 0 0
Pilin_PilX PF11530 Minor type IV pilin, PilX 1 0 2
PilJ PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term 1 3 2
PilM PF07419 PilM 1 1 2
PilM_2 PF11104 Type IV pilus assembly protein PilM; 0 3 1
PilN PF05137 Fimbrial assembly protein (PilN) 0 0 0
PilO PF04350 Pilus assembly protein, PilO 1 1 1
PilP PF04351 Pilus assembly protein, PilP 2 2 5
PilS PF08805 PilS N terminal 1 4 3
Pilt PF15453 Protein incorporated later into Tight Junctions 0 0 0
Pilus_CpaD PF09476 Pilus biogenesis CpaD protein (pilus_cpaD) 0 0 0
Pilus_PilP PF11356 Type IV pilus biogenesis 0 0 2
PilX PF13681 Type IV pilus assembly protein PilX C-term 0 0 0
PilX_N PF14341 PilX N-terminal 0 0 0
PilZ PF07238 PilZ domain 5 4 14
PIN PF01850 PIN domain 4 13 17
Pinin_SDK_memA PF04696 pinin/SDK/memA/ protein conserved region 0 0 0
Pinin_SDK_N PF04697 pinin/SDK conserved region 0 0 0
PINIT PF14324 PINIT domain 1 1 2
PIN_2 PF10130 PIN domain 0 0 0
PIN_3 PF13470 PIN domain 0 0 0
PIN_4 PF13638 PIN domain 1 2 6
PIP49_C PF12260 Protein-kinase domain of FAM69 0 0 0
PIP49_N PF14875 N-term cysteine-rich ER, FAM69 0 0 0
PIP5K PF01504 Phosphatidylinositol-4-phosphate 5-Kinase 0 2 3
PipA PF07108 PipA protein 0 0 0
PIR PF00399 Yeast PIR protein repeat 0 0 0
Pirin PF02678 Pirin 1 7 11
Pirin_C PF05726 Pirin C-terminal cupin domain 1 2 9
PIRT PF15099 Phosphoinositide-interacting protein family 0 0 0
PITH PF06201 PITH domain 0 0 2
Piwi PF02171 Piwi domain 4 21 47
PixA PF12306 Inclusion body protein 0 0 0
PK PF00224 Pyruvate kinase, barrel domain 3 36 63
PKD PF00801 PKD domain 2 5 11
PKD_channel PF08016 Polycystin cation channel 0 0 0
PKI PF02827 cAMP-dependent protein kinase inhibitor 1 36 114
pKID PF02173 pKID domain 1 1 2
Pkinase PF00069 Protein kinase domain 59 1297 2025
Pkinase_C PF00433 Protein kinase C terminal domain 3 4 58
Pkinase_Tyr PF07714 Protein tyrosine kinase 11 479 706
Pkip-1 PF06878 Pkip-1 protein 0 0 0
PKK PF12474 Polo kinase kinase 0 0 0
PknH_C PF14032 PknH-like extracellular domain 0 2 1
Pkr1 PF08636 ER protein Pkr1 0 0 0
PK_C PF02887 Pyruvate kinase, alpha/beta domain 3 19 65
PLA1 PF02253 Phospholipase A1 1 5 7
PLA2G12 PF06951 Group XII secretory phospholipase A2 precursor (PLA2G12) 0 0 0
PLA2_B PF01735 Lysophospholipase catalytic domain 1 0 1
PLA2_inh PF02988 Phospholipase A2 inhibitor 0 0 0
PLAC PF08686 PLAC (protease and lacunin) domain 0 0 0
PLAC8 PF04749 PLAC8 family 0 0 0
PLAC9 PF15205 Placenta-specific protein 9 0 0 0
Planc_extracel PF07595 Planctomycete extracellular 0 0 0
Plant_all_beta PF10532 Plant specific N-all beta domain 0 0 0
Plant_NMP1 PF06694 Plant nuclear matrix protein 1 (NMP1) 0 0 0
Plant_tran PF04827 Plant transposon protein 0 0 0
Plant_vir_prot PF01307 Plant viral movement protein 0 0 0
Plant_zn_clust PF10533 Plant zinc cluster domain 0 0 0
Plasmid_killer PF05015 Plasmid maintenance system killer protein 0 0 0
Plasmid_parti PF01672 Putative plasmid partition protein 0 0 0
Plasmid_RAQPRD PF09686 Plasmid protein of unknown function (Plasmid_RAQPRD) 0 0 0
Plasmid_stabil PF05016 Plasmid stabilisation system protein 5 12 16
Plasmid_stab_B PF10784 Plasmid stability protein 1 0 1
plasmid_Toxin PF12703 Toxin of toxin-antitoxin type 1 system 0 0 0
Plasmid_Txe PF06769 Plasmid encoded toxin Txe 2 4 4
Plasmodium_HRP PF05403 Plasmodium histidine-rich protein (HRPII/III) 0 0 0
Plasmodium_Vir PF05795 Plasmodium vivax Vir protein 0 0 0
Plasmod_dom_1 PF09715 Plasmodium protein of unknown function (Plasmod_dom_1) 0 0 0
Plasmod_MYXSPDY PF07981 Plasmodium repeat_MYXSPDY 0 0 0
Plasmod_Pvs28 PF06247 Plasmodium ookinete surface protein Pvs28 1 2 3
PLAT PF01477 PLAT/LH2 domain 8 7 59
PLATZ PF04640 PLATZ transcription factor 0 0 0
PLC-beta_C PF08703 PLC-beta C terminal 3 2 2
PLDc PF00614 Phospholipase D Active site motif 0 0 1
PLDc_2 PF13091 PLD-like domain 1 14 19
PLDc_3 PF13918 PLD-like domain 0 0 0
PLDc_N PF13396 Phospholipase_D-nuclease N-terminal 0 0 0
PLD_C PF12357 Phospholipase D C terminal 0 0 0
Plectin PF00681 Plectin repeat 1 0 2
Plexin_cytopl PF08337 Plexin cytoplasmic RasGAP domain 2 5 13
PLRV_ORF5 PF01690 Potato leaf roll virus readthrough protein 0 0 0
PLU-1 PF08429 PLU-1-like protein 0 0 0
Plug PF07715 TonB-dependent Receptor Plug Domain 7 21 53
Plug_translocon PF10559 Plug domain of Sec61p 3 0 12
Plus-3 PF03126 Plus-3 domain 1 4 3
PM0188 PF11477 Sialyltransferase PMO188 1 12 16
PMAIP1 PF15150 Phorbol-12-myristate-13-acetate-induced 1 0 4
PmbA_TldD PF01523 Putative modulator of DNA gyrase 1 4 4
PMBR PF09373 Pseudomurein-binding repeat 0 0 0
PMC2NT PF08066 PMC2NT (NUC016) domain 0 0 0
PMD PF10536 Plant mobile domain 0 0 0
PMEI PF04043 Plant invertase/pectin methylesterase inhibitor 4 8 12
PMG PF05287 PMG protein 0 0 0
PMI_typeI PF01238 Phosphomannose isomerase type I 1 11 7
PMM PF03332 Eukaryotic phosphomannomutase 1 9 7
PmoA PF14100 Methane oxygenase PmoA 0 0 0
PMP1_2 PF08114 ATPase proteolipid family 0 0 0
PMP22_Claudin PF00822 PMP-22/EMP/MP20/Claudin family 0 0 0
Pmp3 PF01679 Proteolipid membrane potential modulator 0 0 0
PMR5N PF14416 PMR5 N terminal Domain 0 0 0
PmrD PF11183 Polymyxin resistance protein PmrD 0 0 2
PMSI1 PF15322 Protein missing in infertile sperm 1, putative 0 0 0
PMSR PF01625 Peptide methionine sulfoxide reductase 3 10 17
PMT PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase 0 0 0
PMT_2 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase 0 0 0
PMT_C PF11647 C-terminal region of Pasteurella multocida toxin residues 569-1285 1 2 4
Pneumovirus_M2 PF06436 Pneumovirus matrix protein 2 (M2) 0 0 1
Pneumo_att_G PF05539 Pneumovirinae attachment membrane glycoprotein G 0 0 0
Pneumo_M2 PF07380 Pneumovirus M2 protein 0 0 0
Pneumo_matrix PF03393 Pneumovirus matrix protein 0 3 2
Pneumo_ncap PF03246 Pneumovirus nucleocapsid protein 1 1 4
Pneumo_NS1 PF03438 Pneumovirus NS1 protein 0 0 0
Pneumo_phosprot PF02478 Pneumovirus phosphoprotein 0 0 0
PNGaseA PF12222 Peptide N-acetyl-beta-D-glucosaminyl asparaginase amidase A 0 0 0
PNK3P PF08645 Polynucleotide kinase 3 phosphatase 2 13 13
PNMA PF14893 PNMA 0 0 0
PNPase PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain 4 2 14
PNPase_C PF12111 Polyribonucleotide phosphorylase C terminal 3 0 3
PNPOx_C PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region 1 7 19
PNP_UDP_1 PF01048 Phosphorylase superfamily 3 123 283
PNRC PF15365 Proline-rich nuclear receptor coactivator 0 0 0
PNTB PF02233 NAD(P) transhydrogenase beta subunit 3 9 20
POC1 PF10450 POC1 chaperone 3 0 1
PocR PF10114 Sensory domain found in PocR 0 0 0
Podoplanin PF05808 Podoplanin 0 1 1
Podovirus_Gp16 PF05894 Podovirus DNA encapsidation protein (Gp16) 0 0 0
PolC_DP2 PF03833 DNA polymerase II large subunit DP2 0 1 1
Pollen_allerg_1 PF01357 Pollen allergen 2 2 9
Pollen_allerg_2 PF01620 Ribonuclease (pollen allergen) 1 4 2
Pollen_Ole_e_I PF01190 Pollen proteins Ole e I like 0 0 0
POLO_box PF00659 POLO box duplicated region 3 9 29
PolyA_pol PF01743 Poly A polymerase head domain 3 6 13
PolyA_pol_arg_C PF12626 Polymerase A arginine-rich C-terminus 2 0 4
PolyA_pol_RNAbd PF12627 Probable RNA and SrmB- binding site of polymerase A 3 1 12
PolyG_pol PF01518 Sigma NS protein 0 0 0
Polyhedrin PF00738 Polyhedrin 0 3 4
Polyketide_cyc PF03364 Polyketide cyclase / dehydrase and lipid transport 2 13 16
Polyketide_cyc2 PF10604 Polyketide cyclase / dehydrase and lipid transport 2 18 46
Polyoma_agno PF01736 Polyomavirus agnoprotein 0 0 0
Polyoma_coat PF00718 Polyomavirus coat protein 2 9 20
Polyoma_coat2 PF00761 Polyomavirus coat protein 1 0 1
Polyoma_lg_T_C PF06431 Polyomavirus large T antigen C-terminus 3 4 7
polyprenyl_synt PF00348 Polyprenyl synthetase 1 85 176
Polysacc_deac_1 PF01522 Polysaccharide deacetylase 1 23 25
Polysacc_deac_2 PF04748 Divergent polysaccharide deacetylase 1 1 2
Polysacc_deac_3 PF15421 Putative polysaccharide deacetylase 0 2 1
Polysacc_lyase PF14099 Polysaccharide lyase 0 9 6
Polysacc_synt PF01943 Polysaccharide biosynthesis protein 0 0 0
Polysacc_synt_2 PF02719 Polysaccharide biosynthesis protein 1 14 9
Polysacc_synt_3 PF13440 Polysaccharide biosynthesis protein 0 0 0
Polysacc_synt_4 PF04669 Polysaccharide biosynthesis 0 0 1
Polysacc_synt_C PF14667 Polysaccharide biosynthesis C-terminal domain 0 0 0
Polysacc_syn_2C PF08485 Polysaccharide biosynthesis protein C-terminal 0 0 0
Poly_export PF02563 Polysaccharide biosynthesis/export protein 2 0 3
Pol_alpha_B_N PF08418 DNA polymerase alpha subunit B N-terminal 4 1 3
POM121 PF15229 POM121 family 0 0 0
Pombe_5TM PF09437 Pombe specific 5TM protein 0 0 0
Ponericin PF07442 Ponericin 0 0 0
POP1 PF06978 Ribonucleases P/MRP protein subunit POP1 0 0 0
Popeye PF04831 Popeye protein conserved region 0 0 0
POPLD PF08170 POPLD (NUC188) domain 0 0 0
POR PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase 4 4 13
PorB PF11565 Alpha helical Porin B 1 5 4
Porin_1 PF00267 Gram-negative porin 4 30 49
Porin_2 PF02530 Porin subfamily 0 0 0
Porin_3 PF01459 Eukaryotic porin 0 1 3
Porin_4 PF13609 Gram-negative porin 0 7 14
Porin_OmpG PF09381 Outer membrane protein G (OmpG) 1 8 6
Porin_OmpL1 PF11389 Leptospira porin protein OmpL1 0 0 0
Porin_O_P PF07396 Phosphate-selective porin O and P 1 5 1
Porphobil_deam PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain 2 6 8
Porphobil_deamC PF03900 Porphobilinogen deaminase, C-terminal domain 2 2 8
Porph_ging PF09697 Protein of unknown function (Porph_ging) 0 0 0
PORR PF11955 Plant organelle RNA recognition domain 0 0 0
POR_N PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg 4 9 11
Post_transc_reg PF13797 Post-transcriptional regulator 0 0 0
POT1 PF02765 Telomeric single stranded DNA binding POT1/CDC13 2 5 23
Potassium_chann PF11404 Potassium voltage-gated channel 0 1 3
Potass_KdpF PF09604 F subunit of K+-transporting ATPase (Potass_KdpF) 0 0 0
potato_inhibit PF00280 Potato inhibitor I family 3 10 53
Potex_coat PF06184 Potexvirus coat protein 1 0 1
POTRA_1 PF08478 POTRA domain, FtsQ-type 1 0 4
POTRA_2 PF08479 POTRA domain, ShlB-type 2 0 5
Potyvirid-P3 PF13608 Protein P3 of Potyviral polyprotein 0 0 0
Poty_coat PF00767 Potyvirus coat protein 0 0 0
Poty_PP PF08440 Potyviridae polyprotein 0 0 0
Pou PF00157 Pou domain - N-terminal to homeobox domain 4 2 11
POX PF07526 Associated with HOX 0 0 0
Poxvirus PF06227 dsDNA Poxvirus 1 2 10
Poxvirus_B22R PF04395 Poxvirus B22R protein 0 0 0
Poxvirus_B22R_C PF13168 Poxvirus B22R protein C-terminal 0 0 0
Poxvirus_B22R_N PF13169 Poxvirus B22R protein N-terminal 0 0 0
Pox_A11 PF05061 Poxvirus A11 Protein 0 0 0
Pox_A12 PF04651 Poxvirus A12 protein 0 0 0
Pox_A14 PF05767 Poxvirus virion envelope protein A14 0 0 0
Pox_A21 PF05323 Poxvirus A21 Protein 0 0 0
Pox_A22 PF04848 Poxvirus A22 protein 0 0 0
Pox_A28 PF04584 Poxvirus A28 family 0 0 0
Pox_A30L_A26L PF06086 Orthopoxvirus A26L/A30L protein 0 0 0
Pox_A31 PF05771 Poxvirus A31 protein 0 0 0
Pox_A32 PF04665 Poxvirus A32 protein 0 0 0
Pox_A3L PF05288 Poxvirus A3L Protein 0 0 0
Pox_A51 PF04948 Poxvirus A51 protein 0 0 0
Pox_A6 PF04924 Poxvirus A6 protein 0 0 0
Pox_A8 PF04745 VITF-3 subunit protein 0 0 0
Pox_A9 PF04835 A9 protein conserved region 0 0 0
Pox_Ag35 PF03286 Pox virus Ag35 surface protein 0 0 0
Pox_ATPase-GT PF10640 mRNA capping enzyme N-terminal, ATPase and guanylyltransferase 0 0 0
Pox_A_type_inc PF04508 Viral A-type inclusion protein repeat 0 0 0
Pox_C4_C10 PF03336 Poxvirus C4/C10 protein 0 0 0
Pox_C7_F8A PF03287 Poxvirus C7/F8A protein 0 0 0
Pox_D2 PF04701 Pox virus D2 protein 0 0 0
Pox_D3 PF04580 Chordopoxvirinae D3 protein 0 0 0
Pox_D5 PF03288 Poxvirus D5 protein-like 1 0 1
Pox_E10 PF04805 E10-like protein conserved region 0 0 0
Pox_E2-like PF04497 Poxviridae protein 0 0 0
Pox_E6 PF04656 Pox virus E6 protein 0 0 0
Pox_E8 PF03394 Poxvirus E8 protein 0 0 0
Pox_F11 PF04943 Poxvirus F11 protein 0 0 0
Pox_F12L PF03337 Poxvirus F12L protein 0 0 0
Pox_F15 PF04596 Poxvirus protein F15 0 0 0
Pox_F16 PF04708 Poxvirus F16 protein 0 0 0
Pox_F17 PF04767 DNA-binding 11 kDa phosphoprotein 0 0 0
Pox_G5 PF04599 Poxvirus G5 protein 0 0 0
Pox_G7 PF05503 Poxvirus G7-like 0 0 0
Pox_H7 PF04787 Late protein H7 0 0 0
Pox_I1 PF03289 Poxvirus protein I1 0 0 0
Pox_I3 PF04661 Poxvirus I3 ssDNA-binding protein 0 0 0
Pox_I5 PF04713 Poxvirus protein I5 0 0 0
Pox_I6 PF04595 Poxvirus I6-like family 0 0 0
Pox_int_trans PF05718 Poxvirus intermediate transcription factor 0 0 0
Pox_J1 PF03338 Poxvirus J1 protein 0 0 0
Pox_L3_FP4 PF03339 Poxvirus L3/FP4 protein 0 0 0
Pox_L5 PF04872 Poxvirus L5 protein family 0 0 0
Pox_LP_H2 PF03356 Viral late protein H2 0 0 0
Pox_M2 PF04887 Poxvirus M2 protein 0 0 0
Pox_MCEL PF03291 mRNA capping enzyme 2 6 10
Pox_mRNA-cap PF03341 Poxvirus mRNA capping enzyme, small subunit 2 1 1
Pox_P21 PF05313 Poxvirus P21 membrane protein 0 0 0
Pox_P35 PF03213 Poxvirus P35 protein 0 0 0
Pox_P4A PF03395 Poxvirus P4A protein 0 0 0
Pox_P4B PF03292 Poxvirus P4B major core protein 0 0 0
Pox_polyA_pol PF03296 Poxvirus poly(A) polymerase nucleotidyltransferase domain 4 3 6
Pox_polyA_pol_C PF12629 Poxvirus poly(A) polymerase C-terminal domain 3 3 6
Pox_polyA_pol_N PF12630 Poxvirus poly(A) polymerase N-terminal domain 3 2 6
Pox_Rap94 PF03294 RNA polymerase-associated transcription specificity factor, Rap94 0 0 0
Pox_Rif PF03340 Poxvirus rifampicin resistance protein 1 2 4
Pox_RNA_pol PF03293 Poxvirus DNA-directed RNA polymerase, 18 kD subunit 0 0 0
Pox_RNA_Pol_19 PF05320 Poxvirus DNA-directed RNA polymerase 19 kDa subunit 0 0 0
Pox_RNA_Pol_22 PF05273 Poxvirus RNA polymerase 22 kDa subunit 0 0 0
Pox_RNA_pol_35 PF03396 Poxvirus DNA-directed RNA polymerase, 35 kD subunit 0 0 0
Pox_ser-thr_kin PF05445 Poxvirus serine/threonine protein kinase 0 0 0
Pox_T4_C PF04490 Poxvirus T4 protein, C terminus 3 1 1
Pox_T4_N PF04491 Poxvirus T4 protein, N terminus 2 1 1
Pox_TAA1 PF03295 Poxvirus trans-activator protein A1 C-terminal 0 0 0
Pox_TAP PF03355 Viral Trans-Activator Protein 0 0 0
Pox_VERT_large PF04441 Poxvirus early transcription factor (VETF), large subunit 0 0 0
Pox_vIL-18BP PF05566 Orthopoxvirus interleukin 18 binding protein 1 0 1
Pox_VLTF3 PF04947 Poxvirus Late Transcription Factor VLTF3 like 0 0 0
Pox_VP8_L4R PF04498 Poxvirus nucleic acid binding protein VP8/L4R 0 0 0
PP-binding PF00550 Phosphopantetheine attachment site 12 45 105
PP-binding_2 PF14573 Acyl-carrier 0 0 1
PP1 PF07430 Phloem filament protein PP1 0 0 0
PP1c_bdg PF10488 Phosphatase-1 catalytic subunit binding region 0 0 0
PP1_bind PF15276 Protein phosphatase 1 binding 0 0 0
PP1_inhibitor PF05361 PKC-activated protein phosphatase-1 inhibitor 0 1 4
PP2 PF14299 Phloem protein 2 0 0 0
PP28 PF10252 Casein kinase substrate phosphoprotein PP28 0 0 0
PP2C PF00481 Protein phosphatase 2C 6 14 38
PP2C_2 PF13672 Protein phosphatase 2C 1 9 11
PP2C_C PF07830 Protein serine/threonine phosphatase 2C, C-terminal domain 1 1 7
PPAK PF02818 PPAK motif 0 0 0
PPARgamma_N PF12577 PPAR gamma N-terminal region 0 0 0
PPC PF04151 Bacterial pre-peptidase C-terminal domain 3 8 14
PPDFL PF15060 Differentiation and proliferation regulator 0 0 0
PPDK_N PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 2 1 11
PPE PF00823 PPE family 1 1 1
PPI_Ypi1 PF07491 Protein phosphatase inhibitor 0 0 0
PPK2 PF03976 Polyphosphate kinase 2 (PPK2) 1 9 3
PPO1_DWL PF12142 Polyphenol oxidase middle domain 1 0 5
PPO1_KFDV PF12143 Protein of unknown function (DUF_B2219) 0 0 0
PPP1R35_C PF15503 Protein phosphatase 1 regulatory subunit 35 C-terminus 0 0 0
PPP4R2 PF09184 PPP4R2 0 0 0
PPP5 PF08321 PPP5 TPR repeat region 3 1 14
PPPI_inhib PF14895 Protein phosphatase 1 inhibitor 0 0 0
PPR PF01535 PPR repeat 0 1 4
PPR_1 PF12854 PPR repeat 0 0 0
PPR_2 PF13041 PPR repeat family 0 0 0
PPR_3 PF13812 Pentatricopeptide repeat domain 0 1 4
PPTA PF01239 Protein prenyltransferase alpha subunit repeat 5 58 96
Pput2613-deam PF14427 Pput_2613-like deaminase 0 0 0
PPV_E1_C PF00519 Papillomavirus helicase 2 5 7
PPV_E1_N PF00524 E1 Protein, N terminal domain 0 0 0
PPV_E2_C PF00511 E2 (early) protein, C terminal 1 5 16
PPV_E2_N PF00508 E2 (early) protein, N terminal 2 3 8
Ppx-GppA PF02541 Ppx/GppA phosphatase family 1 11 8
PP_kinase PF02503 Polyphosphate kinase middle domain 3 2 3
PP_kinase_C PF13090 Polyphosphate kinase C-terminal domain 3 4 3
PP_kinase_N PF13089 Polyphosphate kinase N-terminal domain 2 4 3
PP_M1 PF03012 Phosphoprotein 1 2 4
PQ-loop PF04193 PQ loop repeat 0 0 0
PqiA PF04403 Paraquat-inducible protein A 0 0 0
PQQ PF01011 PQQ enzyme repeat 4 5 20
PqqA PF08042 PqqA family 0 0 0
PqqD PF05402 Coenzyme PQQ synthesis protein D (PqqD) 0 1 1
PQQ_2 PF13360 PQQ-like domain 4 6 14
PQQ_3 PF13570 PQQ-like domain 1 2 3
PRA-CH PF01502 Phosphoribosyl-AMP cyclohydrolase 1 2 1
PRA-PH PF01503 Phosphoribosyl-ATP pyrophosphohydrolase 1 10 12
PRA1 PF03208 PRA1 family protein 0 0 0
PRAI PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase 2 3 8
PRANC PF09372 PRANC domain 0 0 0
PRAP PF15314 Proline-rich acidic protein 1, pregnancy-specific uterine 0 0 0
PRC PF05239 PRC-barrel domain 5 12 117
PrcB_C PF14343 PrcB C-terminal 0 0 0
PRCC PF10253 Mitotic checkpoint regulator, MAD2B-interacting 0 0 0
PRCH PF03967 Photosynthetic reaction centre, H-chain N-terminal region 3 23 110
PRD PF00874 PRD domain 2 7 6
Prd1-P2 PF09214 Bacteriophage Prd1, adsorption protein P2 0 2 2
PRD_Mga PF08270 M protein trans-acting positive regulator (MGA) PRD domain 0 0 0
Pre-SET PF05033 Pre-SET motif 3 7 19
Prefoldin PF02996 Prefoldin subunit 1 1 2
Prefoldin_2 PF01920 Prefoldin subunit 2 5 4
Prefoldin_3 PF13758 Prefoldin subunit 0 0 0
PRELI PF04707 PRELI-like family 0 0 0
Prenylcys_lyase PF07156 Prenylcysteine lyase 0 0 0
Prenyltrans PF00432 Prenyltransferase and squalene oxidase repeat 3 49 114
Prenyltransf PF01255 Putative undecaprenyl diphosphate synthase 1 29 35
Prenyltrans_1 PF13243 Prenyltransferase-like 1 1 6
Prenyltrans_2 PF13249 Prenyltransferase-like 4 28 103
PRESAN PF09687 Plasmodium RESA N-terminal 0 0 0
Presenilin PF01080 Presenilin 0 0 1
Preseq_ALAS PF09029 5-aminolevulinate synthase presequence 0 0 2
PRE_C2HC PF07530 Associated with zinc fingers 0 0 0
PRF PF06875 Plethodontid receptivity factor PRF 0 0 0
PrgH PF09480 Type III secretion system protein PrgH-EprH (PrgH) 2 3 9
PrgI PF12666 PrgI family protein 0 0 0
PrgU PF09627 PrgU-like protein 1 1 1
PRiA4_ORF3 PF07929 Plasmid pRiA4b ORF-3-like protein 1 0 1
Pribosyltran PF00156 Phosphoribosyl transferase domain 5 60 119
Pribosyltran_N PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 3 12 19
Pribosyl_synth PF14572 Phosphoribosyl synthetase-associated domain 2 4 13
priB_priC PF07445 Primosomal replication protein priB and priC 0 0 1
PriCT_1 PF08708 Primase C terminal 1 (PriCT-1) 0 0 1
PriCT_2 PF08707 Primase C terminal 2 (PriCT-2) 0 0 0
Prim-Pol PF09250 Bifunctional DNA primase/polymerase, N-terminal 1 4 4
Prim_Zn_Ribbon PF08273 Zinc-binding domain of primase-helicase 0 1 1
Prion PF00377 Prion/Doppel alpha-helical domain 2 9 92
Prion_bPrPp PF11587 Major prion protein bPrPp - N terminal 0 0 1
Prion_octapep PF03991 Copper binding octapeptide repeat 1 0 2
Prismane PF03063 Prismane/CO dehydrogenase family 3 28 26
PRK PF00485 Phosphoribulokinase / Uridine kinase family 1 39 47
PrkA PF06798 PrkA serine protein kinase C-terminal domain 0 0 0
PRKCSH PF07915 Glucosidase II beta subunit-like protein 0 2 1
PRKCSH-like PF12999 Glucosidase II beta subunit-like 0 0 0
PRKCSH_1 PF13015 Glucosidase II beta subunit-like protein 0 0 1
PrmA PF06325 Ribosomal protein L11 methyltransferase (PrmA) 3 11 18
PRMT5 PF05185 PRMT5 arginine-N-methyltransferase 3 9 12
pRN1_helical PF13010 Primase helical domain 1 0 4
PRNT PF15174 Prion-related protein testis-specific 0 0 0
Pro-kuma_activ PF09286 Pro-kumamolisin, activation domain 1 4 3
Pro-MCH PF05824 Pro-melanin-concentrating hormone (Pro-MCH) 0 0 0
Pro-NT_NN PF07421 Neurotensin/neuromedin N precursor 0 0 1
Pro-rich PF15240 Proline-rich 0 0 0
Pro-rich_19 PF15455 Proline-rich 19 0 0 0
PRO8NT PF08082 PRO8NT (NUC069), PrP8 N-terminal domain 0 0 0
PROCN PF08083 PROCN (NUC071) domain 0 0 0
PROCT PF08084 PROCT (NUC072) domain 5 1 9
Profilin PF00235 Profilin 2 16 35
Prog_receptor PF02161 Progesterone receptor 0 0 0
Proho_convert PF12177 Prohormone convertase enzyme 0 0 2
Prok-E2_A PF14457 Prokaryotic E2 family A 0 0 0
Prok-E2_B PF14461 Prokaryotic E2 family B 0 0 0
Prok-E2_C PF14459 Prokaryotic E2 family C 0 0 0
Prok-E2_D PF14460 Prokaryotic E2 family D 0 0 0
Prok-E2_E PF14462 Prokaryotic E2 family E 0 0 0
Prok-JAB PF14464 Prokaryotic homologs of the JAB domain 1 2 4
Prok-RING_1 PF14446 Prokaryotic RING finger family 1 0 0 0
Prok-RING_2 PF14445 Prokaryotic RING finger family 2 0 0 0
Prok-RING_4 PF14447 Prokaryotic RING finger family 4 0 0 0
Prok-TraM PF09228 Prokaryotic Transcriptional repressor TraM 3 1 5
Prokineticin PF06607 Prokineticin 0 0 2
Prok_Ub PF14454 Prokaryotic Ubiquitin 0 0 0
PROL5-SMR PF15621 Proline-rich submaxillary gland androgen-regulated family 0 0 0
Prolactin_RP PF15172 Prolactin-releasing peptide 0 0 0
Prolamin_like PF05617 Prolamin-like 0 0 0
Prominin PF05478 Prominin 0 0 0
PRONE PF03759 PRONE (Plant-specific Rop nucleotide exchanger) 2 1 3
Propeptide_C1 PF08127 Peptidase family C1 propeptide 1 0 4
Propeptide_C25 PF08126 Propeptide_C25 1 3 1
Propep_M14 PF02244 Carboxypeptidase activation peptide 2 10 16
Prophage_tail PF06605 Prophage endopeptidase tail 0 3 1
ProQ PF04352 ProQ/FINO family 2 2 2
ProRS-C_1 PF09180 Prolyl-tRNA synthetase, C-terminal 2 3 10
ProRS-C_2 PF09181 Prolyl-tRNA synthetase, C-terminal 1 0 1
ProSAAS PF07259 ProSAAS precursor 0 0 0
Prosystemin PF07376 Prosystemin 0 0 0
Protamine_3 PF08188 Spermatozal protamine family 0 0 0
Protamine_P1 PF00260 Protamine P1 0 0 0
Protamine_P2 PF00841 Sperm histone P2 0 0 0
Proteasome PF00227 Proteasome subunit 10 43 107
Proteasome_A_N PF10584 Proteasome subunit A N-terminal signature 7 4 71
Proteasom_PSMB PF10508 Proteasome non-ATPase 26S subunit 0 0 0
Proteasom_Rpn13 PF04683 Proteasome complex subunit Rpn13 ubiquitin receptor 1 0 6
Protein_K PF12283 Bacteriophage protein K 0 0 0
Prothymosin PF03247 Prothymosin/parathymosin family 1 0 2
Protocadherin PF08374 Protocadherin 0 0 0
Protoglobin PF11563 Protoglobin 1 12 20
Prot_inhib_II PF02428 Potato type II proteinase inhibitor family 3 1 10
Pro_3_hydrox_C PF05373 L-proline 3-hydroxylase, C-terminal 2 0 2
Pro_Al_protease PF02983 Alpha-lytic protease prodomain 2 0 3
Pro_CA PF00484 Carbonic anhydrase 1 22 38
Pro_dh PF01619 Proline dehydrogenase 3 16 17
Pro_dh-DNA_bdg PF14850 DNA-binding domain of Proline dehydrogenase 2 1 12
Pro_isomerase PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 6 60 169
Pro_racemase PF05544 Proline racemase 1 8 13
Prp18 PF02840 Prp18 domain 1 0 1
Prp19 PF08606 Prp19/Pso4-like 0 0 0
Prp19_bind PF06991 Splicing factor, Prp19-binding domain 0 0 0
PRP1_N PF06424 PRP1 splicing factor, N-terminal 0 0 0
PRP21_like_P PF12230 Pre-mRNA splicing factor PRP21 like protein 2 1 1
PRP3 PF08572 pre-mRNA processing factor 3 (PRP3) 0 0 0
Prp31_C PF09785 Prp31 C terminal domain 0 0 0
PRP38 PF03371 PRP38 family 0 0 0
PRP38_assoc PF12871 Pre-mRNA-splicing factor 38-associated hydrophilic C-term 0 0 0
PRP4 PF08799 pre-mRNA processing factor 4 (PRP4) like 1 0 2
PRP8_domainIV PF12134 PRP8 domain IV core 4 8 24
PrpF PF04303 PrpF protein 1 4 4
PrpR_N PF06506 Propionate catabolism activator 1 2 2
PRRSV_2b PF07069 Porcine reproductive and respiratory syndrome virus 2b 0 0 0
PRRSV_Env PF02340 PRRSV putative envelope protein 0 0 0
PrsW-protease PF13367 Protease prsW family 0 0 0
PRTase_1 PF11202 Phosphoribosyl transferase (PRTase) 0 0 0
PRTase_2 PF15609 Phosphoribosyl transferase 0 0 0
PRTase_3 PF15610 PRTase ComF-like 0 0 0
PRTP PF01366 Herpesvirus processing and transport protein 0 0 0
PRT_C PF08372 Plant phosphoribosyltransferase C-terminal 0 0 0
PRY PF13765 SPRY-associated domain 4 1 6
Pr_beta_C PF12465 Proteasome beta subunits C terminal 2 1 56
PS-DH PF14765 Polyketide synthase dehydratase 4 5 9
PsaA_PsaB PF00223 Photosystem I psaA/psaB protein 16 8 8
PsaD PF02531 PsaD 6 2 7
PsaL PF02605 Photosystem I reaction centre subunit XI 4 4 7
PsaM PF07465 Photosystem I protein M (PsaM) 2 2 3
PsaN PF05479 Photosystem I reaction centre subunit N (PSAN or PSI-N) 1 1 4
PsaX PF08078 PsaX family 2 2 3
Psb28 PF03912 Psb28 protein 0 0 1
PsbH PF00737 Photosystem II 10 kDa phosphoprotein 9 9 14
PsbI PF02532 Photosystem II reaction centre I protein (PSII 4.8 kDa protein) 6 8 14
PsbJ PF01788 PsbJ 15 10 14
PsbK PF02533 Photosystem II 4 kDa reaction centre component 9 10 14
PsbL PF02419 PsbL protein 12 12 14
PsbM PF05151 Photosystem II reaction centre M protein (PsbM) 10 12 14
PsbN PF02468 Photosystem II reaction centre N protein (psbN) 0 0 0
PsbP PF01789 PsbP 1 3 4
PsbQ PF05757 Oxygen evolving enhancer protein 3 (PsbQ) 1 2 4
PsbR PF04725 Photosystem II 10 kDa polypeptide PsbR 0 0 0
PsbT PF01405 Photosystem II reaction centre T protein 7 11 14
PsbU PF06514 Photosystem II 12 kDa extrinsic protein (PsbU) 6 4 14
PsbW PF07123 Photosystem II reaction centre W protein (PsbW) 0 0 0
PsbX PF06596 Photosystem II reaction centre X protein (PsbX) 8 9 13
PsbY PF06298 Photosystem II protein Y (PsbY) 3 3 1
PSCyt1 PF07635 Planctomycete cytochrome C 0 0 0
PSCyt2 PF07583 Protein of unknown function (DUF1549) 0 0 0
PSCyt3 PF07627 Protein of unknown function (DUF1588) 0 0 0
PSD1 PF07587 Protein of unknown function (DUF1553) 0 0 0
PSD2 PF07624 Protein of unknown function (DUF1585) 0 0 0
PSD3 PF07626 Protein of unknown function (DUF1587) 0 0 0
PSD4 PF07631 Protein of unknown function (DUF1592) 0 0 0
PSD5 PF07637 Protein of unknown function (DUF1595) 0 0 0
PSDC PF12588 Phophatidylserine decarboxylase 0 0 0
PseudoU_synth_1 PF01416 tRNA pseudouridine synthase 1 5 8
PseudoU_synth_2 PF00849 RNA pseudouridylate synthase 2 11 15
PSGP PF07276 Apopolysialoglycoprotein (PSGP) 0 0 0
PSI PF01437 Plexin repeat 4 4 16
PsiA PF06952 PsiA protein 0 0 0
PsiB PF06290 Plasmid SOS inhibition protein (PsiB) 1 1 1
PsiE PF06146 Phosphate-starvation-inducible E 0 0 0
PsiF_repeat PF07769 psiF repeat 0 0 0
PSII PF00421 Photosystem II protein 17 22 16
PSII_BNR PF14870 Photosynthesis system II assembly factor YCF48 0 0 1
PSII_Pbs27 PF13326 Photosystem II Pbs27 0 1 3
PSII_Ycf12 PF05969 Photosystem II complex subunit Ycf12 8 6 12
PSI_8 PF00796 Photosystem I reaction centre subunit VIII 4 2 8
PSI_PsaE PF02427 Photosystem I reaction centre subunit IV / PsaE 6 1 12
PSI_PsaF PF02507 Photosystem I reaction centre subunit III 5 4 8
PSI_PsaH PF03244 Photosystem I reaction centre subunit VI 3 4 4
PSI_PsaJ PF01701 Photosystem I reaction centre subunit IX / PsaJ 3 3 8
PSI_PSAK PF01241 Photosystem I psaG / psaK 2 3 7
PSK PF06404 Phytosulfokine precursor protein (PSK) 0 0 0
PSK_trans_fac PF07704 Rv0623-like transcription factor 0 0 0
PSP PF04046 PSP 0 0 0
PSP1 PF04468 PSP1 C-terminal conserved region 0 0 0
PSP94 PF05825 Beta-microseminoprotein (PSP-94) 1 0 4
PspA_IM30 PF04012 PspA/IM30 family 0 0 0
PspB PF06667 Phage shock protein B 0 0 0
PspC PF04024 PspC domain 0 0 0
PSRP-3_Ycf65 PF04839 Plastid and cyanobacterial ribosomal protein (PSRP-3 / Ycf65) 0 0 1
PSRT PF07636 PSRT 0 0 0
PSS PF03034 Phosphatidyl serine synthase 0 0 0
Psu PF07455 Phage polarity suppression protein (Psu) 0 3 2
PS_Dcarbxylase PF02666 Phosphatidylserine decarboxylase 0 0 0
PS_pyruv_trans PF04230 Polysaccharide pyruvyl transferase 0 0 0
PT PF04886 PT repeat 0 0 0
PT-HINT PF07591 Pretoxin HINT domain 1 0 3
PT-TG PF14449 Pre-toxin TG 0 0 0
PT-VENN PF04829 Pre-toxin domain with VENN motif 0 0 0
PTase_Orf2 PF11468 Aromatic prenyltransferase Orf2 1 18 11
PTA_PTB PF01515 Phosphate acetyl/butaryl transferase 1 13 12
PTB PF08416 Phosphotyrosine-binding domain 0 4 7
PTCB-BRCT PF12738 twin BRCT domain 2 3 5
PTCRA PF15028 Pre-T-cell antigen receptor 1 1 1
PTE PF02126 Phosphotriesterase family 1 40 81
PTEN_C2 PF10409 C2 domain of PTEN tumour-suppressor protein 3 7 12
Pterin_4a PF01329 Pterin 4 alpha carbinolamine dehydratase 2 7 13
Pterin_bind PF00809 Pterin binding enzyme 5 51 71
PTH2 PF01981 Peptidyl-tRNA hydrolase PTH2 1 4 8
PTN_MK_C PF01091 PTN/MK heparin-binding protein family, C-terminal domain 1 0 3
PTN_MK_N PF05196 PTN/MK heparin-binding protein family, N-terminal domain 1 0 3
PTPA PF03095 Phosphotyrosyl phosphate activator (PTPA) protein 1 5 7
PTPLA PF04387 Protein tyrosine phosphatase-like protein, PTPLA 0 0 0
PTPlike_phytase PF14566 Inositol hexakisphosphate 1 13 15
PTPS PF01242 6-pyruvoyl tetrahydropterin synthase 1 13 18
PTPS_related PF10131 6-pyruvoyl-tetrahydropterin synthase related domain; membrane protein 0 0 0
PTP_N PF12453 Protein tyrosine phosphatase N terminal 0 0 0
PTR PF12789 Phage tail repeat like 0 0 0
PTR2 PF00854 POT family 1 7 8
PTRF_SDPR PF15237 PTRF/SDPR family 0 0 0
PTS-HPr PF00381 PTS HPr component phosphorylation site 10 10 53
PTSIIA_gutA PF03829 PTS system glucitol/sorbitol-specific IIA component 1 1 1
PTSIIB_sorb PF03830 PTS system sorbose subfamily IIB component 2 5 9
PTS_2-RNA PF01885 RNA 2'-phosphotransferase, Tpt1 / KptA family 0 3 1
PTS_EIIA_1 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 6 2 15
PTS_EIIA_2 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 3 7 14
PTS_EIIB PF00367 phosphotransferase system, EIIB 3 5 5
PTS_EIIC PF02378 Phosphotransferase system, EIIC 1 3 1
PTS_EIIC_2 PF13303 Phosphotransferase system, EIIC 0 0 0
PTS_IIA PF02255 PTS system, Lactose/Cellobiose specific IIA subunit 3 5 9
PTS_IIB PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 2 5 16
PUA PF01472 PUA domain 10 11 36
PUA_2 PF14306 PUA-like domain 3 11 22
PUB PF09409 PUB domain 0 4 6
PUCC PF03209 PUCC protein 0 0 0
PucR PF07905 Purine catabolism regulatory protein-like family 0 0 0
PUD PF03714 Bacterial pullanase-associated domain 2 5 9
PUF PF00806 Pumilio-family RNA binding repeat 1 7 37
PufQ PF05398 PufQ cytochrome subunit 0 0 0
PUL PF08324 PUL domain 2 3 5
PulG PF11773 Type II secretory pathway pseudopilin 0 0 0
PulS_OutS PF09691 Bacterial chaperone lipoprotein (PulS_OutS) 1 2 4
Pup PF05639 Pup-like protein 1 2 3
Pup_ligase PF03136 Pup-ligase protein 1 3 4
PurA PF04845 PurA ssDNA and RNA-binding protein 1 2 1
PurS PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase 4 2 9
Pur_DNA_glyco PF02245 Methylpurine-DNA glycosylase (MPG) 1 4 6
PuR_N PF09182 Bacterial purine repressor, N-terminal 2 4 2
Put_DNA-bind_N PF06971 Putative DNA-binding protein N-terminus 2 7 10
Put_Phosphatase PF06888 Putative Phosphatase 0 0 0
PV-1 PF06637 PV-1 protein (PLVAP) 0 0 0
PvlArgDC PF01862 Pyruvoyl-dependent arginine decarboxylase (PvlArgDC) 1 4 5
PVL_ORF50 PF07768 PVL ORF-50-like family 0 0 0
PV_NSP1 PF12433 Parvovirus non-structural protein 1 0 0 0
PWI PF01480 PWI domain 0 0 3
PWWP PF00855 PWWP domain 1 10 28
PX PF00787 PX domain 3 14 40
PXA PF02194 PXA domain 0 0 0
PXB PF12828 PX-associated 0 0 0
PXPV PF12778 PXPV repeat (3 copies) 0 0 0
PXT1 PF15214 Peroxisomal testis-specific protein 1 0 0 0
PYC_OADA PF02436 Conserved carboxylase domain 4 4 22
PYNP_C PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain 2 3 16
PyocinActivator PF11112 Pyocin activator protein PrtN 0 0 0
Pyocin_S PF06958 S-type Pyocin 3 1 3
PyrBI_leader PF08052 PyrBI operon leader peptide 0 0 0
PyrI PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain 2 7 58
Pyridoxal_deC PF00282 Pyridoxal-dependent decarboxylase conserved domain 2 30 29
Pyridox_oxase_2 PF12766 Pyridoxamine 5'-phosphate oxidase 1 4 2
Pyridox_oxidase PF01243 Pyridoxamine 5'-phosphate oxidase 3 16 52
Pyridox_ox_2 PF12900 Pyridoxamine 5'-phosphate oxidase 1 14 15
Pyrid_oxidase_2 PF13883 Pyridoxamine 5'-phosphate oxidase 1 1 1
PYRIN PF02758 PAAD/DAPIN/Pyrin domain 2 2 13
PyrI_C PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain 3 1 58
Pyrophosphatase PF00719 Inorganic pyrophosphatase 1 26 71
Pyr_excise PF03013 Pyrimidine dimer DNA glycosylase 0 4 6
Pyr_redox PF00070 Pyridine nucleotide-disulphide oxidoreductase 10 35 183
Pyr_redox_2 PF07992 Pyridine nucleotide-disulphide oxidoreductase 20 90 250
Pyr_redox_3 PF13738 Pyridine nucleotide-disulphide oxidoreductase 2 6 24
Pyr_redox_dim PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 5 38 155
PYST-C1 PF09690 Plasmodium yoelii subtelomeric region (PYST-C1) 0 0 0
PY_rept_46 PF09689 Plasmodium yoelii repeat (PY_rept_46) 0 0 0
P_C PF06640 P protein C-terminus 0 0 0
P_gingi_FimA PF06321 Major fimbrial subunit protein (FimA) 1 5 5
P_proprotein PF01483 Proprotein convertase P-domain 2 5 5